Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03800 ATGGATAGCAGCCAACATGAAAATGGTAGGCATAACGTGGACTACTACAGAGGAGCACATTCCCTGCATCAAGTAAAGGAGCCAAATGCATTAGTCATGAATAAAAAAATAAGGTCCATTATGGCTGAAAGGCAGGCTGCCATTCTAGAACACGAACTAGAGGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCTCGTGATTTGGCCCTTCGACAAAGGGATGAAGCACTTGCGCAAAGGGATAATGCCCTAAAGGAACGGGATAATGCCCTCACAGCACTTAAAAGTCAGAACATTTTCAAGTCAGGTGATGGAGCTCAACGTGGATCAAAGCGGATGCGCCAAACTGCATGCAGCCCAAAGGATATATCCAGAAGGGATGTCTCTCCAATGACGGCTAAAGTTTCTGAAGCTGTCAAATCTAATCAAGCTAAAAGAATGAAGGATGAAAATGTAATTAATTCTAAGGTATCAAAACCACATAGCAAGGCAAAGAAAATGGGCGAGGATTTAAATAGGCAGGCAGCTTCTGAAGGGATAAAGTTCAAATCTGAATGGGATATGCAGGATGTTGGCTTGAATTTGGTTGCATTTGATGAAACTATCATGCCTGTCCCAATATGCACCTGCACTGGAGTACCCCGGCAGTGCTACAAATGGGGGAATGGCGGATGGCAGTCTTCTTGTTGTACCACGACGTTGTCAGTGTATCCACTGCCACAGCTTCCAAACAAGCGCCACGCCCGCATTGGGGGACGAAAGATGAGTGGGAGTGTCTTTACAAGATTGCTTAGTAGGTTTGCTTCGCAAGGTCATGACTTATCTACACCATTGGATCTTAAGAACTACTGGGCTAGACACGGAACAAATCGGTACATTACTATCAAGTAG 894 0.4474 MDSSQHENGRHNVDYYRGAHSLHQVKEPNALVMNKKIRSIMAERQAAILEHELEAAISEKNEALAARDLALRQRDEALAQRDNALKERDNALTALKSQNIFKSGDGAQRGSKRMRQTACSPKDISRRDVSPMTAKVSEAVKSNQAKRMKDENVINSKVSKPHSKAKKMGEDLNRQAASEGIKFKSEWDMQDVGLNLVAFDETIMPVPICTCTGVPRQCYKWGNGGWQSSCCTTTLSVYPLPQLPNKRHARIGGRKMSGSVFTRLLSRFASQGHDLSTPLDLKNYWARHGTNRYITIK 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03800 297 Coils Coil 46 87 - -
Arst3g03800 297 MobiDBLite consensus disorder prediction 102 134 - -
Arst3g03800 297 Pfam GAGA binding protein-like family 25 297 IPR010409 -
Arst3g03800 297 PANTHER - 1 297 IPR010409 -
Arst3g03800 297 SMART GAGA_bind_2 1 297 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03800 Arst-Chr3 107975024 107977722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03800 2 297 BBR or BPC Transcription factor family AT2G21240 56.250 5.24e-114 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Arst3g03800 GAGA_bind 9.9e-93 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03800 - - gmx:100813103 447.203