Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03792 ATGGAAAAGCTAAATTTTGTGAAGAAGAACGGGGTAAGTAGAATGCCTCCTGGATTCAGATTCCAGCCAACGGATGAAGAGCTTGTGTTTCAGTATTTGAAATGTAAGGTCTTCTCATTCCCCTTGCCCGCTTCCATGATTCCTGACATCAATCTCTCCAACTATGATCCTTGGGATTTGCCAGGAAATTGTGATGAACATCAAGAGATGTATTTCTTCAGCAGCAAGGAACCCAAGTATAGAAATGGAAGCCGCATGAACCGAACAACCACCACTGGCTATTGGAAGGCAACAGGATCCGACAAAAGAATCATTTCATCTTCTAATAATAGTGACGATAATAGCATTCTTGGCATTAGAAAAACCCTAGTGTTTTACCAAGGGAAATCTCCCAATGGCACTAGAACTCACTGGGTCTTGCATGAATATCGCCTGGCTAGTACTACTCTACATGCTAATAACAATGCTTGCGATATAGGAGATTGGGTTCTGTGCCGCTTATCGGTGAAGAAAAGGAGTGTTGGGAGTGGTAGCATCATCATAAGCAAGAAAGCACGTTCTTCAGCATCTTCATCCTCATCTTCTTCCACTTCAAGTAATAACGTCATGGAAGTATCTTCTTCATATGCTTCTTAA 636 0.4182 MEKLNFVKKNGVSRMPPGFRFQPTDEELVFQYLKCKVFSFPLPASMIPDINLSNYDPWDLPGNCDEHQEMYFFSSKEPKYRNGSRMNRTTTTGYWKATGSDKRIISSSNNSDDNSILGIRKTLVFYQGKSPNGTRTHWVLHEYRLASTTLHANNNACDIGDWVLCRLSVKKRSVGSGSIIISKKARSSASSSSSSSTSSNNVMEVSSSYAS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03792 211 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 195 - -
Arst3g03792 211 SUPERFAMILY NAC domain 12 170 IPR036093 GO:0003677|GO:0006355
Arst3g03792 211 Gene3D NAC domain 24 175 IPR036093 GO:0003677|GO:0006355
Arst3g03792 211 Pfam No apical meristem (NAM) protein 16 145 IPR003441 GO:0003677|GO:0006355
Arst3g03792 211 ProSiteProfiles NAC domain profile. 15 170 IPR003441 GO:0003677|GO:0006355
Arst3g03792 211 MobiDBLite consensus disorder prediction 182 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03792 Arst-Chr3 107796293 107797522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03792 1 173 NAC Transcription Factor Family AT5G13180 56.069 3.98e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst3g03792 NAM 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03792 - - adu:107480040 371.318