Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03717 ATGGATGGGAGAGAAGCCATGGCATTTACTAGTGGGTCTTCTCCATTTTACGTGCATAGAGAGAGTGGAGGGTTCCAAGGATCTCCAGGATTCAGAGCTTTGTCAAACACTGCCGTTCAATCTCAGTCAAATGCAAAGGGTGGCGGAGGCGGCTCTGTTGGTTCTAATTCCTCATTTGCATTACAGGTTCAACCTCAAGCACAGGCTCGTGCCGGTTTTAGTCATGGCATTGGCATTGGTGCCTCATCTTCTGGTGGTGGAGTGCCTCCTTCTTCCTCAGGTGAGCCTGTGAAGAAGAAGAGAGGGAGACCCCGCAAGTATGGCCCGGAAGGACCAGGACCAGTTTCTTTGAGACTTTCATCAATGTCTGCCCCCGCTTGTTGGAATGCTGGTTCAACCTCTGATTCCCAGAAAAGGGGTAGAGGACGCCCTCCGGGATCTGGAAGGAAACAACAGCTGGCTACTCTTGGTGAATGGATGAATAGTTCTGCAGGGCTGGCTTTTTCACCTCATGTAATCTCCATTGGAGTAGGGGAGGACATTGTAGCAAAGCTATTGTCGATATCACAGCAGAGACCACGGGCACTCTGCATCATGTCGGGTACTGGGATAGTTTCTCTAGTTACTCTCAGGCAGCCTGCTTCTACTAACAACAGTGTCACGATTGAGGGCCGATTCCAAATATTGTGTTTATCTGGTTCTTACTTGGTTGCTGAAGATGGTGGACCGTCCAATAGAACAGGTGGCATAAGTGTTTCCCTTTCTAGCTCCGACGGCCGTGTTATTGGTGGTGGTGTTGCAGTGCTTATTGCTGGAAGCCCAGTGCAGGTGGTAGTATGCAGTTTTGTATATAGTGGTAGCTCTAAGACCAAGCCCACGCAAGCTACCCTCATGAAAGAAGAGAGTTCCGAGCCTCAGCGCAATGACAAGTTAGCTTCTTTGGCCAGTGCTCCGCATAGTCAAAACTACATCCCTTCTGCTACAGGCATTTGGCCTGGATCACGACCTGCTGATCTCAAGAGCGTGCACGGACACACTGGCATTGACTTGACACGTGGTTGA 1062 0.5009 MDGREAMAFTSGSSPFYVHRESGGFQGSPGFRALSNTAVQSQSNAKGGGGGSVGSNSSFALQVQPQAQARAGFSHGIGIGASSSGGGVPPSSSGEPVKKKRGRPRKYGPEGPGPVSLRLSSMSAPACWNAGSTSDSQKRGRGRPPGSGRKQQLATLGEWMNSSAGLAFSPHVISIGVGEDIVAKLLSISQQRPRALCIMSGTGIVSLVTLRQPASTNNSVTIEGRFQILCLSGSYLVAEDGGPSNRTGGISVSLSSSDGRVIGGGVAVLIAGSPVQVVVCSFVYSGSSKTKPTQATLMKEESSEPQRNDKLASLASAPHSQNYIPSATGIWPGSRPADLKSVHGHTGIDLTRG 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03717 353 CDD DUF296 170 282 IPR005175 -
Arst3g03717 353 SUPERFAMILY AF0104/ALDC/Ptd012-like 167 284 - -
Arst3g03717 353 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 64 309 IPR039605 GO:0003680
Arst3g03717 353 MobiDBLite consensus disorder prediction 1 151 - -
Arst3g03717 353 MobiDBLite consensus disorder prediction 29 69 - -
Arst3g03717 353 MobiDBLite consensus disorder prediction 122 140 - -
Arst3g03717 353 Pfam Plants and Prokaryotes Conserved (PCC) domain 170 283 IPR005175 -
Arst3g03717 353 Gene3D - 170 301 - -
Arst3g03717 353 ProSiteProfiles PPC domain profile profile. 162 303 IPR005175 -
Arst3g03717 353 SMART AT_hook_2 138 150 IPR017956 GO:0003677
Arst3g03717 353 SMART AT_hook_2 98 110 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03717 Arst-Chr3 104289468 104292169 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03717 1 353 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 46.565 5.12e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03717 - - gmx:100798706 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03717 3 104289468 104292169 Arst3g03717 3 104289468 104292169 ECH
Arst5g01329 5 14246373 14249558 Arst3g03717 3 104289468 104292169 PCT