Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03716 ATGGATGGGAGAGAAGCCATGGCATTTACTAGTGGGTCTTCTCCATTTTACGTGCATAGAGAGAGTGGAGGGTTCCAAGGATCTCCAGGATTCAGAGCTTTGTCAAACACTGCCGTTCAATCTCAGTCAAATGCAAAGGGTGGCGGAGGCGGCTCTGTTGGTTCTAATTCCTCATTTGCATTACAGGTTCAACCTCAAGCACAGGCTCGTGCCGGTTTTAGTCATGGCATTGGCATTGGTGCCTCATCTTCTGGTGGTGGAGTGCCTCCTTCTTCCTCAGGTGAGCCTGTGAAGAAGAAGAGAGGGAGACCCCGCAAGTATGGCCCGGAAGGACCAGGACCAGTTTCTTTGAGACTTTCATCAATGTCTGCCCCCGCTTGTTGGAATGCTGGTTCAACCTCTGATTCCCAGAAAAGGGGTAGAGGACGCCCTCCGGGATCTGGAAGGAAACAACAGCTGGCTACTCTTGGTGAATGGATGAATAGTTCTGCAGGGCTGGCTTTTTCACCTCATGTAATCTCCATTGGAGTAGGGGAGGACATTGTAGCAAAGCTATTGTCGATATCACAGCAGAGACCACGGGCACTCTGCATCATGTCGGGTACTGGGATAGTTTCTCTAGTTACTCTCAGGCAGCCTGCTTCTACTAACAACAGTGTCACGATTGAGGGCCGATTCCAAATATTGTGTTTATCTGGTTCTTACTTGGTTGCTGAAGATGGTGGACCGTCCAATAGAACAGGTGGCATAAGTGTTTCCCTTTCTAGCTCCGACGGCCGTGTTATTGGTGGTGGTGTTGCAGTGCTTATTGCTGGAAGCCCAGTGCAGCCTTTGCTGGCTGCAGGTGGTAGTATGCAGTTTTGTATATAG 870 0.4989 MDGREAMAFTSGSSPFYVHRESGGFQGSPGFRALSNTAVQSQSNAKGGGGGSVGSNSSFALQVQPQAQARAGFSHGIGIGASSSGGGVPPSSSGEPVKKKRGRPRKYGPEGPGPVSLRLSSMSAPACWNAGSTSDSQKRGRGRPPGSGRKQQLATLGEWMNSSAGLAFSPHVISIGVGEDIVAKLLSISQQRPRALCIMSGTGIVSLVTLRQPASTNNSVTIEGRFQILCLSGSYLVAEDGGPSNRTGGISVSLSSSDGRVIGGGVAVLIAGSPVQPLLAAGGSMQFCI 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03716 289 SUPERFAMILY AF0104/ALDC/Ptd012-like 167 275 - -
Arst3g03716 289 CDD DUF296 170 276 IPR005175 -
Arst3g03716 289 ProSiteProfiles PPC domain profile profile. 162 289 IPR005175 -
Arst3g03716 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 64 276 IPR039605 GO:0003680
Arst3g03716 289 MobiDBLite consensus disorder prediction 1 151 - -
Arst3g03716 289 Gene3D - 170 287 - -
Arst3g03716 289 MobiDBLite consensus disorder prediction 29 69 - -
Arst3g03716 289 MobiDBLite consensus disorder prediction 122 140 - -
Arst3g03716 289 SMART AT_hook_2 138 150 IPR017956 GO:0003677
Arst3g03716 289 SMART AT_hook_2 98 110 IPR017956 GO:0003677
Arst3g03716 289 Pfam Plants and Prokaryotes Conserved (PCC) domain 170 279 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03716 Arst-Chr3 104289455 104291891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03716 1 276 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 50.836 5.42e-77 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03716 - - gmx:100798706 347.436