Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03693 ATGTTGACGGAGAACTTCAAAGAACAGCTTGCTTTGTCTGTTAGAAGCATCCAGTGGAGCTATGCAATATTCTGGTCTACTTCATCTACCCAACCCGGGGTGTTGAGTTGGGGGGAAGGATATTACAATGGAGACATTAAGACAAGGAAGACAAGTCAAGGAGTGGAACTCAATTCTGATCAGATAGGGTTGCAGCGGAGTGAGCAGCTTCGAGAGTTATACAAGTCCCTCAAAACTGTAGAAGCCAGCCCTCAAACCAAAAGGCCTTCAGCAGCACTGTCTCCGGAGGATCTCACAGATACAGAATGGTACTATTTGGTTTGCATGTCCTTTGTATTCAACATTGGCCAAGGGTTACCAGGAAAGGCTCTTGCAAAAGGTGAACCAATTTGGCTGTGTGATGCTCCTTCTAGTGATTGTAGAGATTTTAGTCGCTGTCTTCTGGCTAAGAGTGCATCCATTCAGACAGTGGTGTGCTTTCCTTTTATGGATGGGGTCATTGAGCTGGGTACAACTGATTATGTCTCAGAAGATCTCAGTCTCATTCAACAGATCAGAACTTCCTTCTTGGATATTCTTGATGTCGGTGTTCATAATGTACATGGAGCATTTAATGCGAAACAATCTCAAGAAGTAGGAGGTGCATTAATCAGCATAACTTCTCCTAATAACAGTTCAAATGCATTTCAAGCCAATCAACCACCAGATGAAACATTCATGGTTGAAAGGATAAATAATGGCACCTCTCAAGTCCAAAGTTGGCAAATTATGGATGATGAATTGAGCAATGCTGTTCATAATTCTAGTGACTGCGTATCTCAAACTCTTCACAGTCCTGAGAACGTTGCTTCTCTTCCAAAGGGTGAAAACCTCACTGATAGTGCCAAAGACCTTCAAAAGTGCAATAACTCAAAAATGACATTAGTTGATCCTCGAAGCGATGATTGGCATTATCAGATGGTTCTTTCTACCCTTCTAAAAAGCTCAGACCAGTTAATCATGGGGATGCATTTTCAAAATTTTCATCAGGAATCAAGCTTTACAAGTTGGAAGAAAGCTGGGTCAGTGAGCTACCAAAGGCCAAGAACTGGAGGAAGCTCACAAGCTTTATTGAAGAAGGTATTGTTTGAAGTTCCTCGGATGCACTTGGATGGGATACTTGAGTATCAAGAAGAGAATGACTTTAAGGAAGCAGTGAGAACAGAAGCTGATGAAAATGGCATGAACCATGTTTTGTCAGAGAGAAGGAGAAGAGCAAAACTAAATGAAAGGTTTTTAACCCTTAGATCAATGGTCCCTTCAATTACTAAGGATGACAAAGTTTCGATACTAGATGATGCAATAGAATACCTTAGAAAGCTTGAAAAAAGGATAAAAGAGTTGGAAGCTCATAAGGATCTAACAGACAGAGAGGCTAGAACTAAAAGATCACCTCAAGATATGGTGGAGAGGACTTCTGATAATTATTTTAACAAAACGGATAACGGCAATAAATCGATGGCGAAAAAGAGGAAGTCTCGGGACATAGATGACACAAGGCCAGAGATTAATTCAGAATCTTTACTAAAAGGAAGTTCTACTAATGATGTTGCTGTTAACATCAATGAGAATAATGAAGTTGTGATTGAAATGAAATGCCCTTGATTGAATTTTCATTCAGTTCAGTCCAGCGAAGTTGATGGGAATCTTTATTTTACCCTTAAATCTAAGCTCACAGGGCCAACTATTGTATCAGCAAAAAGGATCAAACAAACACTACAAAATGTGGCTTTCAAGTGTTGA 1782 0.4012 MLTENFKEQLALSVRSIQWSYAIFWSTSSTQPGVLSWGEGYYNGDIKTRKTSQGVELNSDQIGLQRSEQLRELYKSLKTVEASPQTKRPSAALSPEDLTDTEWYYLVCMSFVFNIGQGLPGKALAKGEPIWLCDAPSSDCRDFSRCLLAKSASIQTVVCFPFMDGVIELGTTDYVSEDLSLIQQIRTSFLDILDVGVHNVHGAFNAKQSQEVGGALISITSPNNSSNAFQANQPPDETFMVERINNGTSQVQSWQIMDDELSNAVHNSSDCVSQTLHSPENVASLPKGENLTDSAKDLQKCNNSKMTLVDPRSDDWHYQMVLSTLLKSSDQLIMGMHFQNFHQESSFTSWKKAGSVSYQRPRTGGSSQALLKKVLFEVPRMHLDGILEYQEENDFKEAVRTEADENGMNHVLSERRRRAKLNERFLTLRSMVPSITKDDKVSILDDAIEYLRKLEKRIKELEAHKDLTDREARTKRSPQDMVERTSDNYFNKTDNGNKSMAKKRKSRDIDDTRPEINSESLLKGSSTNDVAVNINENNEVVIEMKCPSRAGMFLKIMEAVSSLRLNFHSVQSSEVDGNLYFTLKSKLTGPTIVSAKRIKQTLQNVAFKC 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03693 609 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 405 454 IPR011598 GO:0046983
Arst3g03693 609 SMART finulus 411 460 IPR011598 GO:0046983
Arst3g03693 609 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 189 IPR025610 -
Arst3g03693 609 MobiDBLite consensus disorder prediction 469 522 - -
Arst3g03693 609 PANTHER TRANSCRIPTION FACTOR TT8 4 606 - -
Arst3g03693 609 Gene3D - 397 472 IPR036638 GO:0046983
Arst3g03693 609 Coils Coil 444 471 - -
Arst3g03693 609 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 408 471 IPR036638 GO:0046983
Arst3g03693 609 Gene3D - 101 172 IPR029016 -
Arst3g03693 609 MobiDBLite consensus disorder prediction 497 517 - -
Arst3g03693 609 Pfam Helix-loop-helix DNA-binding domain 409 455 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03693 Arst-Chr3 102781045 102784768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03693 2 609 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 47.231 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst3g03693 bHLH-MYC_N 6.8e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03693 - - ahf:112732736 1173.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03693 3 102781045 102784768 Arst3g03693 3 102781045 102784768 ECH