Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03661 ATGTCTTCTGGTCTGTATTCATTTGAAACCACTTTCCAAGCACATTCAAGCTCAGACATGGTCACTGCTGATGGAGGAGACCTTGCTTTTCTCACTGACCCTTTTCCTTTCTTCGAAAACAGCACTACTAATAATGATATTGGTCAACACTGTTCGAGCAACCAAAGCATGTTCGATGAGGCTCTTTCTTCTTCTTCTGTTGACCCTTTTTCATCTTGCTTCTTTTCTTTCTCTCCTCCAAGTATTCACTTAGAAAACCTTAGCCTTCAGACCAACAACAAGAACAACCGTGTTGATCCCAATTTGGAGAGTGACTTTGCAAGTTTCTCATCGGGTTTTGATGTGACACAAGTAGTGAAGAGTGAGGAGTGCCAAATCGGTGTTGAATTTGATTATGGATATAATAATCATAATCACCAACACTTTTTTCCCCACAGTTATAGCGGTGCTGAGAATGTGGCAAAATACATGCAGAGGAGTTTCAGCAGCAACTCCTTTCATGGCAAACCTGGCAATTTTCTGTTCCAAAATAATCACTCTGACACACTGAACAACAACAATAATAATAACAACATGAAATCTCCAAGTTTTCAAAGGCATGATATGAATTCACCTGAAAACAGTGCCTTCAATGGACAAATGAGGAGGGTGTGCAGCACTGGAGATTTGCAGAAGTGTCAAAGGGAAGGATCATTGTTGGAGGAACCGAATTTCAAAGTAGGGCGTTATAGTGCCGAAGAAAGAAAAGAAAGAATATCAAAATATAGAGCCAAGAGAAGCCAGAGGAACTTCAACAAAACCATCAAGTATGCATGCCGAAAAACACTAGCCGACAATCGACCGCGCATACGTGGCAGATTCGCACGCAACGACGAGGAGCGCGACATTATTCCTATTCCAAATCACAAGGCTCCATGTTCAGCCCGAGATGATGAAGACGAAGAAGTCGATTTCTGGATTGAAGGGTTGCGGTTGCATGAAGAGCAGGAGGATGTAACAGTCAACGCTTATGGACCTAATCAGTTTCAGTACTTTCGTTTCTAA 1044 0.4195 MSSGLYSFETTFQAHSSSDMVTADGGDLAFLTDPFPFFENSTTNNDIGQHCSSNQSMFDEALSSSSVDPFSSCFFSFSPPSIHLENLSLQTNNKNNRVDPNLESDFASFSSGFDVTQVVKSEECQIGVEFDYGYNNHNHQHFFPHSYSGAENVAKYMQRSFSSNSFHGKPGNFLFQNNHSDTLNNNNNNNNMKSPSFQRHDMNSPENSAFNGQMRRVCSTGDLQKCQREGSLLEEPNFKVGRYSAEERKERISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDEERDIIPIPNHKAPCSARDDEDEEVDFWIEGLRLHEEQEDVTVNAYGPNQFQYFRF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03661 347 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 67 317 IPR045281 GO:0009909
Arst3g03661 347 Pfam CCT motif 248 290 IPR010402 GO:0005515
Arst3g03661 347 ProSiteProfiles CCT domain profile. 248 290 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03661 Arst-Chr3 101392144 101394016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03661 244 292 C2C2-CO-like Transcription Factor Family AT5G57660 53.061 1.58e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst3g03661 CCT 9.2e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03661 - - adu:107479916 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01350 5 14395388 14397202 Arst3g03661 3 101392144 101394016 PCT