Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03650 ATGGTTTCATCATCAAGTGGTGGATTCTGCTACACCTACAGCGATAATCCTGGAGGAGGAGGAGGAAGCGGCTTTGTATCTGACCCAGAGATGGAGATGAAATGGAAAACCTTGTTCGCCAACAACGAACCACCACCTCCTACTTGTTTTGATCTAATACTCCAAAACACGCCAAGCCAAGGCCTTTCACTATCTCTTAGCTCAAACAACCCTTCTTCTATTTCTCTCCAATCTTTTCCCCTAAGACAACAACACCATGAGATGGCGCTGCAAGGCCATTACTCGCTCAAGGCGTCCAGGTTCTTGCTACCGGCACAGCAACTCCTCAACGAGTTCTGTAGCCTAGGAACCAAGCAACTCAATAATCAACTCATCAAGCGTAACAAGAACAACACCAACTCCCCACCTCTTACCTCTCTAGACTTGGTTGAATTGCACAAGAGAAAGGCTAAGCTCCTTGTCATGCTCCAAGAGGTGGACACAAGATACGAGCACTACTGTAATCAGATGAAGGGAGTGGTGGCGTCATTTGAGGCCATGGCCGGGGAGGGAGCGGCCACCGTGTACTCGGCACTTGCGCTGAAGGCCATGTCACGCCACTTCAGATGCTTGAAGGATGGGATACTGGAACAGATAGAGGCCACTCGGAAGGGGATGGGAGAGAAGGATCCAATTGCACCGGGCACCACTAAGGGCCAAACCCCCAGGCTTAGAATCATTGACCAGGCTTTGAGACAGCAAAGGGCTTTTCACCAAACCATCTCCATGGAATCTCATCCCTGGAGACCCCAACGTGGCCTTCCTGAACGTTCCGTTTCTCTTCTCCGCGCTTGGCTTTTCGAGCATTTTCTTCACCCGTACCCAAGTGATGTTGATAAACATATTTTAGCACGCCAAACTGGTCTCTCTAGAAGCCAGGTTTCAAATTGGTTTATCAATGCAAGGGTGAGGCTATGGAAGCCAATGGTGGAGGAAATGTACTTGGAAGAAGAGAAGGAGGCTGCTGCAGCATCCTCGGAGGGAGGAGGAGGCAGCAACACTGAAGATTTTCAAAACCTATCTCCAAATTCAGCAGCAGCAAGACCAGAGGATCAGAAGCCTCGCCTACTTCGAATCGATTCGGAATGCATGTCCTCAATCATCAACAACAACTCTGATCATCGCAAAGATAACCATGAGCAGATGAATCAACAAGAGGAGGAACAGTACTTAGGGCGAGGTGTCGCAGACACGTTTGGATCAGTGGAGATTGATTTCTCATCATATCCTGAGGGCTTCAATAGCAGTGGAGGAGGTGCGGTTTCTTTGACGCTAGGGTTACAGCAACACGGTGGAAATGGGGTGAGCTTGGCTTTCCCGCCAGAAACTCATCATCAGCATCAGGCCTCCATGTTCTACTCATCAAGGGACCAGATTATTGAAGACTGTAGTCAACCAGTTCAGTACTCTCTTTTGGATGGCGAAGCACACGCCATGCCCTACAGGAATTTGATGGGGACCCAGTTGCTTCATGACTTGGCCGGATAG 1527 0.4938 MVSSSSGGFCYTYSDNPGGGGGSGFVSDPEMEMKWKTLFANNEPPPPTCFDLILQNTPSQGLSLSLSSNNPSSISLQSFPLRQQHHEMALQGHYSLKASRFLLPAQQLLNEFCSLGTKQLNNQLIKRNKNNTNSPPLTSLDLVELHKRKAKLLVMLQEVDTRYEHYCNQMKGVVASFEAMAGEGAATVYSALALKAMSRHFRCLKDGILEQIEATRKGMGEKDPIAPGTTKGQTPRLRIIDQALRQQRAFHQTISMESHPWRPQRGLPERSVSLLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEEKEAAAASSEGGGGSNTEDFQNLSPNSAAARPEDQKPRLLRIDSECMSSIINNNSDHRKDNHEQMNQQEEEQYLGRGVADTFGSVEIDFSSYPEGFNSSGGGAVSLTLGLQQHGGNGVSLAFPPETHHQHQASMFYSSRDQIIEDCSQPVQYSLLDGEAHAMPYRNLMGTQLLHDLAG 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03650 508 Pfam Homeobox KN domain 278 317 IPR008422 GO:0003677|GO:0006355
Arst3g03650 508 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 67 346 - -
Arst3g03650 508 MobiDBLite consensus disorder prediction 333 368 - -
Arst3g03650 508 MobiDBLite consensus disorder prediction 340 359 - -
Arst3g03650 508 Coils Coil 382 402 - -
Arst3g03650 508 SMART prehox3 90 210 IPR006563 -
Arst3g03650 508 Pfam Associated with HOX 96 208 IPR006563 -
Arst3g03650 508 Gene3D - 264 326 - -
Arst3g03650 508 SMART HOX_1 261 325 IPR001356 GO:0003677
Arst3g03650 508 FunFam BEL1-like homeodomain protein 4 264 326 - -
Arst3g03650 508 ProSiteProfiles 'Homeobox' domain profile. 258 321 IPR001356 GO:0003677
Arst3g03650 508 CDD homeodomain 261 322 IPR001356 GO:0003677
Arst3g03650 508 SUPERFAMILY Homeodomain-like 262 327 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03650 Arst-Chr3 101221315 101224189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03650 40 507 Homeobox Transcription Factor Family AT5G41410 43.636 4.06e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Arst3g03650 POX 3.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03650 - - adu:107479887 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01355 5 14485162 14489470 Arst3g03650 3 101221315 101224189 PCT