LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g03643	ATGGCAACGAAAGAGTCAAGCTCTGCTGGTTCTGGTTCTGGTTCTGGTTCTGGTTCGGCAACAGGGGACGCTAAAATCAAGAGGGTAGTGACCCATGGAGGCAGATATGCACAGTACAATGTGTATGGCAACTTGTTCGAGGTGACTTCAAAGTATGTCCCTCCCATTCGCCCCATTGGCAGAGGTGCTTATGGCATCATCTGTGCTGCTGTGAACTCAGAGACGCACGAACAAGTTGCCATCAAGAAGATTGGTAACGCATTTGACAACATTATTGATGCTAGAAGGACACTCAGAGAAATCAAGCTCCTTCGTCACATGGATCATGAAAATATCATTGCGATAAAGGATATAATACGACCACCGAAAAGGGAGACATTCAACGATGTATACATTGTTTATGAATTGATGGACACTGATCTTCATCACATCATTCATTCTGACCAACCTCTCACTGATGGCCACTGTCAGTACTTCTTGTACCAGCTGTTACGGGGACTGAAATATGTGCATTCAGCGAATGTGTTGCACCGCGATCTGAAGCCGAGTAACCTGCTCATGAATGCCAACTGCGACCTCAAGATTGGCGACTTTGGATTGGCAAGGACTACTTCTGAGCAGGATTTCATGACAGAGTATGTTGTCACCCGATGGTACCGTGCCCCCGAGCTGCTCCTTAACTGTTCTGAGTACACCTCTGCCATTGATGTCTGGTCTGTGGGATGCATTCTTGGTGAGATTATGACCCGAGAGCCCTTGTTCCCTGGCAAGGACTATGTTCATCAACTTAGGCTCATTACTGAGTTGATAGGTTCACCTGACGATGCCAGCCTTGGGTTTCTCCGAAGTGATAATGCAAGAAGATACATCAAGCAGCTTCCGCAGTACCGCAAGCAAAAATTTGCTGCTAGGTTCCCCAATGTCATGCCTGAGGCACTTGATCTCCTAGAAAAGATGCTCATGTTTGATCCTAACAAGCGCATCACAGTTGATGAGGCACTTTGTCATCCATATCTAGCATCACTTCACAACATCAATGATGAGCCGGTTTGTCCGAGGCCATTCAGTTTTGACTTTGAGCATCCAACATGCACTGAAGAGGATGTCAAGGAGCTCATATGGAGGGAATCTGTCAAGTTCAATCCAGATCCACCTTCTCACTAA	1164	0.4648	MATKESSSAGSGSGSGSGSATGDAKIKRVVTHGGRYAQYNVYGNLFEVTSKYVPPIRPIGRGAYGIICAAVNSETHEQVAIKKIGNAFDNIIDARRTLREIKLLRHMDHENIIAIKDIIRPPKRETFNDVYIVYELMDTDLHHIIHSDQPLTDGHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNANCDLKIGDFGLARTTSEQDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYIKQLPQYRKQKFAARFPNVMPEALDLLEKMLMFDPNKRITVDEALCHPYLASLHNINDEPVCPRPFSFDFEHPTCTEEDVKELIWRESVKFNPDPPSH	387

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Arst3g03643	387	CDD	STKc_TEY_MAPK	46	382	-	-
Arst3g03643	387	MobiDBLite	consensus disorder prediction	1	20	-	-
Arst3g03643	387	ProSitePatterns	Protein kinases ATP-binding region signature.	59	83	IPR017441	GO:0005524
Arst3g03643	387	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	51	341	-	-
Arst3g03643	387	MobiDBLite	consensus disorder prediction	1	23	-	-
Arst3g03643	387	Pfam	Protein kinase domain	57	339	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Arst3g03643	387	Gene3D	Phosphorylase Kinase; domain 1	36	376	-	-
Arst3g03643	387	ProSitePatterns	MAP kinase signature.	88	191	IPR003527	GO:0004707\|GO:0005524\|GO:0006468
Arst3g03643	387	FunFam	Mitogen-activated protein kinase	137	366	-	-
Arst3g03643	387	ProSiteProfiles	Protein kinase domain profile.	53	339	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g03643	Arst-Chr3	100469190	100471829	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst3g03643	18	382	MAP Kinase Gene Family	AT4G01370	82.740	0.0	654

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_MAPK	Arst3g03643		Pkinase	1.4e-69	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g03643	-		-	gmx:100807109	715.301

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst5g01360	5	14514008	14516354	Arst3g03643	3	100469190	100471829	PCT

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