Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03606 ATGTCATTGATGGGAGAGGAAGAGATCATGGATGAATGTGAGTATGAGCATGAGGATAGTATTTTTTACGATGAGAAGTATCCTGATGATGAGTCATACTTAGATGAGTTGCAGCAGGAAGAAGAGTTGGGTGATGAGTTAGACGGTGAGGAGATTTTTGCAGAATTGACAGATTATGATTATAATGATGCATATGGATTGGATTCAATTGAGGATTTATTGAAACTTGACTTTTTAAGCATTGGTGAGGTTGAAGTTGACAAGTTTCACTTTGGAACCCTAGCCATTGCTTTTGAATTTTACAACAGATTTGCAAAGAGCCAAGGTTTCAGTGCAAGAAAAGACAAAAATTGGAAGAACTCAACCGACGAGACCTACATGCAGAGATTTGTATGTTTTCGGCAAGGATATCAATTAGAGAAGTGGTACACTTTGCCAAACAGAAAAAGGGAACCAAAGACCGAGACAAGAACTGGGTACGAAGCTCAATTCCTAGTCAAGTTTGTAGGGGTAACTGGAAGATGGCATGTGACCCGATTTTCAAATGTTCATAATCACGAACTATTGGAAGGCCGGTTGAGCAGGTTATTGCCAGCTCATAGGAGTATGTCCAAAGCCGAAATTGCACTCATGAACAACATGCGCAAGTCGGGGATTAGCACATCCCAGGTTTATGCTTTGCTAGCAAGTCAAAGTGGTGGTTTTGACAAGTTGAACTATGGCCCCAGAGACATGTACAATCAAATAGCTAAGGCGATGCGTGAGATTCCAGAGGACGTGGGTAGAGCATTAAATTATTTGGAGGGGATGGCTGCAAACGATAAATCTTTATACTACAAAGAGTTTCGGGCAACGGTTGGAAGGTTGCTAAATCTCTTTTGGTGTGATGGTTTATATAGAGAGGACTATAAATTGTTTGGAGATGTTGTTGCGTTTGATGCTACGTACAACAAGAATAAATATAGGTGTCCTTTTGTTGTGTTCACAGGTGTCAACCATCACAACCAAACTATTGTCTTTGCTGCATGCATTGTAACAGATGAGACGGATGAGACTTATATATGGGTGTTGCAACAGTTTTTGGAGGCAATGGATGGTAGAGTCCCATCCTCTGTGATAACTGATGGGGCAAGGGCAATGAAGAATGCGATTGAGAAAGTATTCCCTGGTACTCACCACAGATTGTGTGCTTGGCATCTCCTGCGTAATGCAACTACAAATATGTGTAGTCCTCGTTTCACATCTAAGTTTAGGGATTGTATGTTAGGAGATTACGAGATTCCAGTGTTCCGTAACAAGTGGCATATATTGGTAGAGGAATTTGGGGTTGAGGAAAAAGAATGGCTAAATGAAATTTATGAGAAACGTCGATCATGGGCAACATGTTACATCCGAGGGAAGTTCTTTGCTGGATTTAGGACTACATCACGTTGCGAGGGTTTGCATTCATTGATTGGGAAGTACACTAAGCCTCATTATGACTTATCCGAGTTTATTGAGCACTTCCAACGAATGTTGGGCCATATGCGTTTTAGGGAATTTTATGCTGAATATGAATCTGCTCGTGGAGTTCCAGTTATGCAAACTTGTATTGAACCCCTTGAGATGTGTGCTGCTGATACTTACACAAGGGAGGTATTCTTTTTATTCAGGCCTATTCTTGTTCGGTCGGGTGCAATGAGAGTCGTGGATTACCAAACAAGAGACAATAGTATAATTTATTATGTTTGTAGGTATGCCAAACCAACAAAGGTGTGGGAGGTTGAGTGGGTGGATAATGGTAACCCAATCACTTGTTCATGCATGCGTATGGAATCATTCGGTATTCCCTGTGAACACATTATCTCTGTATTGGTCCGTAGGGATGTGCGCGAAATTCCTAAATGTCTAGTGTTGCATAGATGGACTAAGAAAGCAAAAGAATCTATGTCTGAGTCAAGTAGTTTTACAAGCGAATTACAAGTTAGCAATCGACTTTGTATCCTCAATGAGTGTGCTAGGATGATGTCAGAGGTTGCATGTGCTACTACAGAGAGGTTCCATGAAGCAAGGGATCTTATGCTTGATCTTTATAGCTCATACAAAGCACTAGATGAAGGGAACACGCCTTCGAAACCTAGATTGGGAGGTGGTACCAATCCTAAAGGGCATAGTGGTCGGAAAAAGCCCCAACATTGCAGTAATTGCAAGAAACCTGGTCATAATAAAACTTCTTGTTCAAAGCGCAATGAAAATGCTTTCAGTACACAAGGTAGCTCTACCGTCAAACTGATGCAATTTATGATGGTGAATGCATGGATGATGTGGAATACGAAACTCAAGAATGGTGGTGAACTTTGGGATTAG 2346 0.4113 MSLMGEEEIMDECEYEHEDSIFYDEKYPDDESYLDELQQEEELGDELDGEEIFAELTDYDYNDAYGLDSIEDLLKLDFLSIGEVEVDKFHFGTLAIAFEFYNRFAKSQGFSARKDKNWKNSTDETYMQRFVCFRQGYQLEKWYTLPNRKREPKTETRTGYEAQFLVKFVGVTGRWHVTRFSNVHNHELLEGRLSRLLPAHRSMSKAEIALMNNMRKSGISTSQVYALLASQSGGFDKLNYGPRDMYNQIAKAMREIPEDVGRALNYLEGMAANDKSLYYKEFRATVGRLLNLFWCDGLYREDYKLFGDVVAFDATYNKNKYRCPFVVFTGVNHHNQTIVFAACIVTDETDETYIWVLQQFLEAMDGRVPSSVITDGARAMKNAIEKVFPGTHHRLCAWHLLRNATTNMCSPRFTSKFRDCMLGDYEIPVFRNKWHILVEEFGVEEKEWLNEIYEKRRSWATCYIRGKFFAGFRTTSRCEGLHSLIGKYTKPHYDLSEFIEHFQRMLGHMRFREFYAEYESARGVPVMQTCIEPLEMCAADTYTREVFFLFRPILVRSGAMRVVDYQTRDNSIIYYVCRYAKPTKVWEVEWVDNGNPITCSCMRMESFGIPCEHIISVLVRRDVREIPKCLVLHRWTKKAKESMSESSSFTSELQVSNRLCILNECARMMSEVACATTERFHEARDLMLDLYSSYKALDEGNTPSKPRLGGGTNPKGHSGRKKPQHCSNCKKPGHNKTSCSKRNENAFSTQGSSTVKLMQFMMVNAWMMWNTKLKNGGELWD 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03606 781 Pfam FAR1 DNA-binding domain 99 189 IPR004330 -
Arst3g03606 781 ProSiteProfiles Zinc finger SWIM-type profile. 586 622 IPR007527 GO:0008270
Arst3g03606 781 SMART 26again6 597 624 IPR006564 GO:0008270
Arst3g03606 781 Pfam MULE transposase domain 309 403 IPR018289 -
Arst3g03606 781 Pfam SWIM zinc finger 593 618 IPR007527 GO:0008270
Arst3g03606 781 MobiDBLite consensus disorder prediction 698 745 - -
Arst3g03606 781 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 86 678 IPR031052 GO:0006355
Arst3g03606 781 MobiDBLite consensus disorder prediction 730 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03606 Arst-Chr3 98513381 98517137 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst3g03606 MULE 9.5e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03606 - - ahf:112720852 791.186