Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03566 ATGGAGTTCCTACGTATTTTGTTATCTTCCATTTGTTTGTTGGTTGTGATTGATCACTGGCAAGGAAATGCTGAACCTGTCGGAGATAAGGAAGCTTTGCTTGATTTTGTGAACAAATTCCCTCCTTCTAGACCTCTGAATTGGGATGAGACCTCCTCCATGTGTGCCAATTGGACCGGAGTCACTTGCAGTGAAGATGAGTCCCGGGTCATCGCCATTCGTCTGCCGGGGGTTGGATTTCGTGGCCCAATTCCGCCGGATACTGTTAGCCGCCTCTCGGCACTGCAAACTTTGAGCCTCAGATCCAATGTCATAACTGGGCGGATACCTTCTGACTTTTCTAATTTGAAGAACTTAACTTTACTGTATCTTCAGTTCAACAATTTCTCTGGTCCTTTGCCTGATTTCTCAGTTTGGAAGAATCTTACTATTGTCAATCTGTCCAATAACCATTTCAATGGCAGCATTCCTGATTCCCTTTCCAATTTGACCGAGATTGCTGGTTTGAACCTTGCAAACAACTCGCTTTCTGGCGAAATTCCCAATCTCCAGTTGCCAAGACTGCAGCTGCTGAATCTGTCTAACAACAATTTGCATGGGAGTGTGCCTAAATCCCTCCAGAGGTTTCCTGATTCGTCATTTTTTGGAAATAATATTTCTCTTGGGAGCTCTCCTGTTGTTCCGCCAGTGCCTCCTCCGGTTTATGGGCCTTCTTCAAGATCTAAGAAGCATGGAAGGCTCAGCGAAACAGCACTGCTGGGAATTACTATTGCCTGTGGTGTTCTAGGCCTTGTGGCATTTGTTTTCTTGATCTTTGTATGCTGCTCAAGAAGGAGGGGTGAAGATGATGATGCCTTCAGTGGGAAGTTGCACAAGGGTGACATGTCTCCCGAGAAAGCTGTATCGAGGAACCAGGATGCGAATAATAAGCTGTCTTTCTTTGAGGGGTGTAATTATGCTTTTGATTTGGAGGATTTACTCAGGGCTTCTGCTGAGGTACTGGGAAAGGGAACGTTTGGTACTGCATACAAGGCAATACTGGAAGATGCAACCACGGTTGTTGTGAAGAGGTTAAAGGAGGTAGCAGTTGGAAAGAAGGATTTTGAGCAACACATGGAAATAGTAGGAAACCTTAAACATGAGAATGTGGTTGAGCTCAAGGCATATTATTATTCCAAAGATGAGAAATTAATGGTATATGATTACTATAGCCAGGGGAGTGTCTCGTCAATGTTACACGATTTCGTGCATGGCAACATCAAATCCTCAAATATCTTCCTCAATGCTAAACAGTATGGTTGTGTATCCGACCTTGGTCTCGCATCCATAATGAGCTCACTTGCCTTACCCATCTCACGAGCTGCTGGTTACCGAGCACCTGAAGTTACGGACACCAGGAAAGCGGCACAACCTTCAGATGTTTACAGCTTTGGCGTGGTGTTACTTGAGCTTCTGACAGGGAAATCTCCTATTCACACAACTGGTGGGGATGAGATTATCCACCTGGTGAGATGGGTTCATTCGGTTGTGCGAGAGGAGTGGACAGCTGAGGTGTTTGACTTAGAGCTGATGAGGTATCCAAATATAGAGGAAGAGATGGTGGAAATGCTACAGATAGCAATGTCATGCGTGGTAAGGATGCCCGACCAGAGACCAAAGATGTCTGAAGTTGTGAAGATGATAGAAAATGTGAGGCAAATTGATGCAGAGACTCAGCCGTCGTCGGACAACCAAGCAGAACAGAAATTACCACAACATGACATCGATAATTCCCCTTCTTCCTCTCCCTCACCCTTGCCAAAAGGAAGTGAATGA 1815 0.4523 MEFLRILLSSICLLVVIDHWQGNAEPVGDKEALLDFVNKFPPSRPLNWDETSSMCANWTGVTCSEDESRVIAIRLPGVGFRGPIPPDTVSRLSALQTLSLRSNVITGRIPSDFSNLKNLTLLYLQFNNFSGPLPDFSVWKNLTIVNLSNNHFNGSIPDSLSNLTEIAGLNLANNSLSGEIPNLQLPRLQLLNLSNNNLHGSVPKSLQRFPDSSFFGNNISLGSSPVVPPVPPPVYGPSSRSKKHGRLSETALLGITIACGVLGLVAFVFLIFVCCSRRRGEDDDAFSGKLHKGDMSPEKAVSRNQDANNKLSFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAVGKKDFEQHMEIVGNLKHENVVELKAYYYSKDEKLMVYDYYSQGSVSSMLHDFVHGNIKSSNIFLNAKQYGCVSDLGLASIMSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDAETQPSSDNQAEQKLPQHDIDNSPSSSPSPLPKGSE 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03566 604 FunFam pollen receptor-like kinase 1 297 402 - -
Arst3g03566 604 Pfam Leucine rich repeat 84 129 IPR001611 GO:0005515
Arst3g03566 604 SUPERFAMILY Protein kinase-like (PK-like) 332 576 IPR011009 -
Arst3g03566 604 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 409 575 - -
Arst3g03566 604 Gene3D Transferase(Phosphotransferase) domain 1 407 590 - -
Arst3g03566 604 MobiDBLite consensus disorder prediction 566 604 - -
Arst3g03566 604 Gene3D Phosphorylase Kinase; domain 1 294 402 - -
Arst3g03566 604 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Arst3g03566 604 PANTHER OS05G0588300 PROTEIN 5 575 - -
Arst3g03566 604 MobiDBLite consensus disorder prediction 567 604 - -
Arst3g03566 604 Pfam Protein kinase domain 414 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g03566 604 Pfam Protein kinase domain 331 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g03566 604 FunFam Probable inactive receptor kinase RLK902 27 184 - -
Arst3g03566 604 ProSitePatterns Protein kinases ATP-binding region signature. 334 365 IPR017441 GO:0005524
Arst3g03566 604 Pfam Leucine rich repeat N-terminal domain 29 64 IPR013210 -
Arst3g03566 604 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515
Arst3g03566 604 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Arst3g03566 604 SUPERFAMILY L domain-like 39 209 - -
Arst3g03566 604 Gene3D Ribonuclease Inhibitor 138 225 IPR032675 -
Arst3g03566 604 ProSiteProfiles Protein kinase domain profile. 328 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03566 Arst-Chr3 95342483 95346241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03566 1 581 Receptor kinase-like Gene Family AT4G23740 61.392 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Arst3g03566 Pkinase 2.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03566 - - adu:107479781 1144.41