Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03560 ATGGCTGCAACTACTGCTTTTTCTTGTTCTGCTTCTTCTTCTTCTTCTATGAAGCACACTACTCAGCACCTCAACCGAACCAAACTCCTCATGGAACAACAACACCCAACCAAGCATCCATATCCTAAACTCATACGAATACGCGTCACCGACGCCGACGCCACCGATTCCTCCAGCGACGACGAACCACCTACCCACTCCTCCACACGCCGCCGAGTCAAGAACTTCGTCAACGAGATCACCATTGCCCCCTCCGCCCAAGAAGCCACCGATACACTCGCTTCCAACAAGAGAAAGAAGAAGGCCAAGTCTACAGCTGCCATCGCAGCTCCGCCCAGCCGCCGGCGTCAGTCAAAGGCCTTCTCCGGGAAGAAGTTCCGGGGAGTGAGGCAGAGACCATGGGGGAAGTGGGCTGCTGAGATAAGAGACCCTTCTCGCCGCGTTAGGTTGTGGCTGGGAACCTACGACACCGCCGAGGAAGCTGCCATGGTGTACGACAACGCTGCCATTCAGCTTCGCGGCGCCGACGCTCTCACGAACTTCATCATTCCGCCGGCGCAGTGCTCGGCGGAGGATAACAATTCCAGCGAAGAAGAATGCACTCCAATCAGCAACAAGAAGGAGAAGAACATGTTGTCTCCCACTTCGGTTCTTCTTCGATGTTGTTCGGAAGAAACAGAATGCGCAACCGCCACCAGTGAAGAATATGAGTATCAGAGCGAGTCAATGTTTCCGATTCCGAACGATTCACTCTTTGATTTCCAAACAGAGGAGATTTTCAGCGATGATTTTTCAAGTGTGTTTTTGAGCTCGATTGACGAGACTCTTTTGGATTTCGGTTTCAAGAGTAGTAGTCCTTGGTACACAGATTATGATGACACTTTCCAAGAGATTGCGGATTTCTTTGTCTCCGATCCTCTTGTGGCTCTCTGA 933 0.5166 MAATTAFSCSASSSSSMKHTTQHLNRTKLLMEQQHPTKHPYPKLIRIRVTDADATDSSSDDEPPTHSSTRRRVKNFVNEITIAPSAQEATDTLASNKRKKKAKSTAAIAAPPSRRRQSKAFSGKKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAAMVYDNAAIQLRGADALTNFIIPPAQCSAEDNNSSEEECTPISNKKEKNMLSPTSVLLRCCSEETECATATSEEYEYQSESMFPIPNDSLFDFQTEEIFSDDFSSVFLSSIDETLLDFGFKSSSPWYTDYDDTFQEIADFFVSDPLVAL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03560 310 ProSiteProfiles AP2/ERF domain profile. 125 182 IPR001471 GO:0003700|GO:0006355
Arst3g03560 310 MobiDBLite consensus disorder prediction 1 22 - -
Arst3g03560 310 Pfam AP2 domain 125 174 IPR001471 GO:0003700|GO:0006355
Arst3g03560 310 CDD AP2 124 181 IPR001471 GO:0003700|GO:0006355
Arst3g03560 310 PRINTS Ethylene responsive element binding protein signature 126 137 IPR001471 GO:0003700|GO:0006355
Arst3g03560 310 PRINTS Ethylene responsive element binding protein signature 148 164 IPR001471 GO:0003700|GO:0006355
Arst3g03560 310 SMART rav1_2 125 188 IPR001471 GO:0003700|GO:0006355
Arst3g03560 310 Gene3D AP2/ERF domain 124 183 IPR036955 GO:0003700|GO:0006355
Arst3g03560 310 FunFam Ethylene-responsive transcription factor 2 124 183 - -
Arst3g03560 310 SUPERFAMILY DNA-binding domain 125 182 IPR016177 GO:0003677
Arst3g03560 310 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 42 227 - -
Arst3g03560 310 MobiDBLite consensus disorder prediction 52 74 - -
Arst3g03560 310 MobiDBLite consensus disorder prediction 52 73 - -
Arst3g03560 310 MobiDBLite consensus disorder prediction 90 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03560 Arst-Chr3 95234394 95235986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03560 17 310 AP2-EREBP Transcription Factor Family AT4G23750 39.067 5.61e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst3g03560 AP2 3.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03560 - - ahf:112732493 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01397 5 15014525 15016330 Arst3g03560 3 95234394 95235986 PCT