Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03543 ATGGAAAATGACGGGCGCTGGGAGCAGAACATACTCATCAACGAGCTAGTTCAGGGGATGGAGGTAGCAAGAAGGTTGAAGGAAGACATGAATGCGACATATTCAGCTGACACAAAAGATTTGTTGCTGCAGAGGATATTATCGTCGTATGAAAAAGCTCTGCTAATTCTAAGATGGAATGCATCAACTTCCAAGTCTCAGAACATGAGTCAAGCAACAGCAACAGCAACCTTGTTTTCAGAGTCACCAATATCTATCAGCGCAAGTCCTCTGAGGGAGGACAATCATAATCAAGAGTTTAAACACGATTCAAAGAAAAGAAAGACAATGGCCAAATGGGTAGATCAAGTGAGAGTGAGCTTTGAGAGTGGCCTTGAAGGACCACATGAAGATGGTTACAACTGGAGAAAATATGGACAGAAAGATATCCTTGGTGCCAAATATCCCAGAAGTTATTATAGGTGCACCTTCCGGAACACTCAGGGGTGCTGGGCCACGAAGCAAGTACAGAGATCAGACGAAGATCCTACCATATTTGACATAACTTACAAAGGAAGGCATACCTGTTCTCAGGGAAACAAGGCTGTTCCGCAACCGAAATCGCCAGACAAACATGAGCAACTGCAATGTCATAGTAACGAAATTCAGCATAGACAAACATCAGAAGAAAGCCTGACAACTTTCGGGACCATTATGACAGTTAAAAGAGATATGGTGGCAAATGGAGAGATGGAATATCCTTTCACTTTCCCTTCAACTTCATTTGGAAGCATGGCACAAGAAAGCTACAGCTTGATTCCTTCAGCCCTGGAGAACGAATCCTTCTTGAGCAGTCATTTCCAAACTCACTTATTATATCCAAACATGCAAGAATTTAAATACCTGCCATCTACGTCTTTCCAGATGAATGAGCTTGATGGGATCTATAATAGGCCACTTTCAGAATCAGATATTACTGAGATCATTTCCACCAACACATCCACCACCAATTCTCCAGTTCCGGAGTTCAATTTCTCACTTGATCCAGTGGAAATTGATCCAAATTTCCCTCCCAATACCCTGGATTTTTCTCCTAGAGCCCTTAACAACAAGAACATCTAG 1101 0.4242 MENDGRWEQNILINELVQGMEVARRLKEDMNATYSADTKDLLLQRILSSYEKALLILRWNASTSKSQNMSQATATATLFSESPISISASPLREDNHNQEFKHDSKKRKTMAKWVDQVRVSFESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYKGRHTCSQGNKAVPQPKSPDKHEQLQCHSNEIQHRQTSEESLTTFGTIMTVKRDMVANGEMEYPFTFPSTSFGSMAQESYSLIPSALENESFLSSHFQTHLLYPNMQEFKYLPSTSFQMNELDGIYNRPLSESDITEIISTNTSTTNSPVPEFNFSLDPVEIDPNFPPNTLDFSPRALNNKNI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03543 366 ProSiteProfiles WRKY domain profile. 124 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g03543 366 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 288 IPR044810 GO:0003700
Arst3g03543 366 FunFam WRKY transcription factor 53 115 192 - -
Arst3g03543 366 SMART WRKY_cls 129 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g03543 366 Pfam WRKY DNA -binding domain 130 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g03543 366 SUPERFAMILY WRKY DNA-binding domain 128 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst3g03543 366 Gene3D WRKY domain 115 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst3g03543 366 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03543 Arst-Chr3 94251010 94252779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03543 7 350 WRKY Transcription Factor Family AT4G11070 36.158 4.32e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst3g03543 WRKY 8.7e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03543 - - adu:107480050 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01410 5 15251209 15252754 Arst3g03543 3 94251010 94252779 PCT