Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03535 AACACGCTGAAGTTTGAGTTTGAACCCAAACTAAAGGAATTCAATTCACTCAACCCTATCCTTCCCCCTGAATCCAAAACCATGGAAATAACGGATGAAAGAAACACATTTGATGACATTGGGTGGTGTTTATCAGATCTGATATTATCATCATCGGGTTCAAACACGTTGGACTCAATCTTCTCTCACTGCCCTCCCACTAATCCCACAGTGGCCTTCCAGCAACCGTTCGGGTGCTCCTCCGTCTACACCCGCCAAAGAAACATCCTGCAGAAGTTGTACGAGCAAAGCCGAGTGACCACGAAGCGTTCTTGTTTTGTTGTTCCCCCTCCCTCGCCATGGAAGAAGAAGCTGTACAGAGGAGTGAGGCAGAGGAGCTGGGGAAAATGGGTGGCTGAGATTCGACTCCCTCAGAACAGAATGAGGGTCTGGCTTGGCACTTACGATACTCCAGAAGCCGCTGCTTATGCTTATGACCGCGCTGCTTATAAGCTTCGTGGCGAGTACGCGCGCTTGAATTTCCCTGCTTTGAAGGAACCCTCCAGTGATGTCCTCTTGTCTTCCCAAGATTCCATCAAGTTTAACTCTCTCAACTGCTACGTGGATGCTAAGATTCGTGCCATATGCCAAAGGCTCAAGCGAGAGAGGAGCATGCGCAAGAATAATAACAACAATACCACTAGTCCTCTCGAGAATCCACGGATGTTCTTGTCTAGTTCAAGCGCCGAGTTTGTTGAAGCAGCTGCTGGCGGTTTCCTTTCAGTAGAGGACAGTATCGTTTTAGCAGAGTGTCCCCCAACAATGACAACAGCAGATTCTGAATCATCCGATGATTTCCAAAACTGTTCCTTAGCAAGACTGCCTTCCTTCGATCCTGACTTGATTTGGGAAGTTCTGCCTAACTAA 906 0.479 NTLKFEFEPKLKEFNSLNPILPPESKTMEITDERNTFDDIGWCLSDLILSSSGSNTLDSIFSHCPPTNPTVAFQQPFGCSSVYTRQRNILQKLYEQSRVTTKRSCFVVPPPSPWKKKLYRGVRQRSWGKWVAEIRLPQNRMRVWLGTYDTPEAAAYAYDRAAYKLRGEYARLNFPALKEPSSDVLLSSQDSIKFNSLNCYVDAKIRAICQRLKRERSMRKNNNNNTTSPLENPRMFLSSSSAEFVEAAAGGFLSVEDSIVLAECPPTMTTADSESSDDFQNCSLARLPSFDPDLIWEVLPN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03535 301 ProSiteProfiles AP2/ERF domain profile. 118 175 IPR001471 GO:0003700|GO:0006355
Arst3g03535 301 Gene3D AP2/ERF domain 118 176 IPR036955 GO:0003700|GO:0006355
Arst3g03535 301 SMART rav1_2 118 181 IPR001471 GO:0003700|GO:0006355
Arst3g03535 301 Pfam AP2 domain 119 168 IPR001471 GO:0003700|GO:0006355
Arst3g03535 301 CDD AP2 117 177 IPR001471 GO:0003700|GO:0006355
Arst3g03535 301 PRINTS Ethylene responsive element binding protein signature 141 157 IPR001471 GO:0003700|GO:0006355
Arst3g03535 301 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Arst3g03535 301 SUPERFAMILY DNA-binding domain 118 176 IPR016177 GO:0003677
Arst3g03535 301 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 55 299 - -
Arst3g03535 301 FunFam Ethylene-responsive transcription factor 2 117 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03535 Arst-Chr3 93800826 93802058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03535 37 301 AP2-EREBP Transcription Factor Family AT1G64380 42.216 9.14e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst3g03535 AP2 1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03535 - - adu:107479760 583.948