Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03514 ATGGTACAACCAATACCCTGTTTGAACTCAGGGTTTAATAGTAGTAGCAAATCTTCGGTGGTGGCGATCTTGTCGAATCCGCCGTTTCCAACGCCGTGGACGTCGCTGTGCCACGTCATATCGTGGGCTATGATCCCGGTTGCCGGTTTTCCGTGGCTGTTTTGGACGGATTACTATTCTGACATAAAGTTGGAATGGGATAACCCAAATTGCGGAAGTTGCGAGGCACGTGGAGGACGGTGTGGGTTCGTTGGGCCAACGCTTCGGGACACTGCTTTTCATGTTGGTTGTTACGATCTTCCCACTCAACTTCAAGGTCTTTCGAGGAAAACCAAGTACGGTTTAGGTATGGGCTTAGGAATACCTGGAGCCTTGTGTATTATTGCGCTTGCATATTTGTTCTACGCCAAGATGAAGACACATGAGCAACAGAGGCTATCAAGAAGTGATTTTTCGACCATAATTTTACCGCGTCTTCCTGCTCAAATCATGGGATTGGATGCTGCTAGCATAGAAAAATACCCCAAAACCCTTCTTGGTGAAAGTGGGCGATTGCCTAAGCCTAATGACAATCTTTGTTCCATATGTCTCTGTGAATACCAGCCCAAGGAGACCTTGAGGACCATACCTGAATGCAATCATTATTTTCATGCCAATTGTATAGATGGATGGCTGAAGATGAATGCTACTTGTCCTCTGTGTCGCAATTTACCTGAAAGATCTGTTGCATCATTAACCCCGTCTATACCTGCATCTCCCACTTATTAG 768 0.4596 MVQPIPCLNSGFNSSSKSSVVAILSNPPFPTPWTSLCHVISWAMIPVAGFPWLFWTDYYSDIKLEWDNPNCGSCEARGGRCGFVGPTLRDTAFHVGCYDLPTQLQGLSRKTKYGLGMGLGIPGALCIIALAYLFYAKMKTHEQQRLSRSDFSTIILPRLPAQIMGLDAASIEKYPKTLLGESGRLPKPNDNLCSICLCEYQPKETLRTIPECNHYFHANCIDGWLKMNATCPLCRNLPERSVASLTPSIPASPTY 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03514 255 CDD RING-H2_EL5-like 193 235 - -
Arst3g03514 255 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 2 238 IPR046948 -
Arst3g03514 255 SMART ring_2 193 234 IPR001841 -
Arst3g03514 255 ProSiteProfiles Zinc finger RING-type profile. 193 235 IPR001841 -
Arst3g03514 255 SUPERFAMILY RING/U-box 188 237 - -
Arst3g03514 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 159 239 IPR013083 -
Arst3g03514 255 Pfam Ring finger domain 192 235 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03514 Arst-Chr3 92567125 92568468 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03514 5 236 C3H Transcription Factor Family AT1G28040 35.772 6.69e-37 130