Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03473 GCGGAGTCGAAAGAGAGGATTGAGGAAACGGTGCGGACGATTCTAGAAGGATCCAACATGGATGAGATGACAGAGTCGAAGATTCGGAAGCAGGCTTCCACCCATCTCGGCCTCGACCTCTCCCAGCCGCCCCTCAAAGCCTTCGTCAAGCAGGTCGTTCAAGCATTCCTCGACGAGAAGCAGCGCCAACCTGAACCTGAAGCAGATCACAACAAGCCGGAGTACGATGACGACGGCGATCTCATCATCTGCAAGCTCTCTGAGAGGAGAAGGGTCACCGTTCAGGACTTCCGAGGCAAAACTTTGGTCTCCATTCGCGAGTATTATCGAAAGGACGGCAAGGAACTCCCTACCTCTAAAGGAATAAGTTTGACAGAGGAGCAATGGTCAGCCTTCAAGAAAAATGTGCCTGCTATAGAAAAGGCCATTAAGAAAATGCAGTCCGGCAACATATAA 456 0.511 MEDAESKERIEETVRTILEGSNMDEMTESKIRKQASTHLGLDLSQPPLKAFVKQVVQAFLDEKQRQPEPEADHNKPEYDDDGDLIICKLSERRRVTVQDFRGKTLVSIREYYRKDGKELPTSKGISLTEEQWSAFKKNVPAIEKAIKKMQSGNI 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03473 154 Pfam DEK C terminal domain 5 60 IPR014876 -
Arst3g03473 154 PIRSF RNA_polymII_KELP 1 153 IPR017415 -
Arst3g03473 154 Gene3D - 1 62 - -
Arst3g03473 154 SUPERFAMILY ssDNA-binding transcriptional regulator domain 86 149 IPR009044 GO:0003677|GO:0006355
Arst3g03473 154 MobiDBLite consensus disorder prediction 61 81 - -
Arst3g03473 154 Pfam Transcriptional Coactivator p15 (PC4) 87 138 IPR003173 GO:0003677|GO:0006355
Arst3g03473 154 MobiDBLite consensus disorder prediction 63 81 - -
Arst3g03473 154 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 5 151 IPR045125 GO:0003713|GO:0060261
Arst3g03473 154 Gene3D Transcriptional Coactivator Pc4; Chain A 76 152 IPR009044 GO:0003677|GO:0006355
Arst3g03473 154 SUPERFAMILY DEK C-terminal domain 4 61 - -
Arst3g03473 154 FunFam RNA polymerase II transcriptional coactivator KELP 76 152 - -
Arst3g03473 154 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 4 61 IPR014876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03473 Arst-Chr3 89603693 89605394 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Arst3g03473 DEK_C 8.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03473 K25815 - gmx:100499671 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03473 3 89603693 89605394 Arst3g03473 3 89603693 89605394 ECH