Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03409 ATGGAGACGGAGGAGGGAGAAAATGGAGTGATCGTGCCACCTCGTTCCGGTGCTGGTAAAAGCCTGTTCGGAATCGCCGCCGCAGCTTCTAGAAGGATGCAACAACAGCAACGGCATAGAGAGAAGGAGAACTCTAACGCTCCTTCGCCTTCAACTTACGATATGGCTGTAACAGGGAGAGTTAGTAGAAAGAAGAAGCATAAGCGTCTTCAGGAATTTTTTACAACGGACTATGATAATTTGAGGAGCGATGGTCCTCCTATTGGTCTCGAATTTGATTCTCTTCCTTCTCGGTCAGAGAGTTACACTCCTTCATATGTAGAGGACTACGGGCCCGCCAAAATGAGAAAGGTTTCCAAGAGTGCATGTGGAAGTCACCCAAGCTTTAATAAGAAAACATCAGTGAAGAAACATGGTATGGGCAAAGGTTTGATGACAGTCTGGAGGGCAACCAATCCTTATGCTGAAGACCTTCCAAATGACTTTGATTTTGATAGCCGAGAGCAAGGCACTCATCTAGTCTCAAAGTCTATGGTACAGAAACCTGTTCGTGAGAACAGAAGAAATAAAACACAGCACACGATAAATAAGTCTCAGGACAAGAGGAAACTTTCCATACAAAGAGAAATGGGGAAATCTAATCTATATGTAACTCAGAACCAGTCATCGGAGGAAAAATGTGAACTTGCAGTGGATAGCGCAATATTTGAGGAGGGATTTGATCAAATTTCAATGTTAGTCGATGATGAGGAGCTTGAGATGAGAGAGTTCCGAGCAGGAATCAATATGCTGTTGTGTTCTGATCATCTTGCTGCAAGTGGAATGTTTGGTTGTGCACTCTGCAAAGATGTGCTAGTTAAGTTCCCCCCAGATACTGTCAAAATGAAGAAACCTATCTGTTTGCAACCTTGGGATTCCTCTCCAGAAATTGTGAAGAAATTATTTAAGGTTTTCCATTTCCTTTATACATATGCTACAGTAGTCAATATATGCCCATTCACTCTGGATGAGTTTGTTCAAGCATTTCATGATAAGGACTCAGTTTTAATTGGAAAGACTCACATAGCCCTTCTCTCACTTCTTCTATCTGACATTGAAGTGGAGCTTACCAATGGTTTTTCACCTCATTTAAATAAGTCCTGCAATTTTCTTGCATTGCTTCATTCAGTTGAAAGTCAAGAATATTCTGTAGACTGCTGGAGAAGTTCTTTGAATGCTCTTACTTGGGTTGAAATACTTCGTCAAGTGCTTGTTGCTTCTGGATTTGGTTCAAAGCAAGGGGCCTTACGAAGAGAGGCACTTAGCAAGGAGTTGAATCTTTTTGTAAACTATGGCCTACACCCTGGCACCTTGAAGGGAGAGTTGTTTAAAATCTTGTCAGAGCGAGGAAACAATGGATGCAAGGTATCTGAGCTAGCAAACTTAAAACAGATTGTAGAATTAAACCTTGATGGCACAACTGGGGACCTGGAATCTTTAATATGTTCCACACTTTCAAGTGATATTACTTTATTTGAAAAGATTTCACCATCTGCATATCGTGTGCGTATGAGCACTGTGACGAAGGACATAGATGATTCTAAATCAGATATGGAGGATGCTGGGAGTGTTGATGATGAAATCAATTACAGTGATACGTTTAGCAGTGATGATGATTTTGAAAATGATTCAAGAGGCGCCAACATGAGAAAACTGAAGTGTGTTAACGGTCATAAAACCAAGAATAATATGCTCAAAGTATATACTGAAATTGATGAGAGCCATCCAGGAGAAATATGGTTGTTAGGACTGATGGAGAGTGAATATTCAGATTTGAAAATTGAAGAAAAATTGAATGCTTTGGCTGCTCTAACTGATCTTCTTTCCTCTGGTTCCAGCATCAGGATGAAGGACCCAACAAAAATCACAGCTGACTGCCATTCGAGCATCCAACATGGTTCTGGAGCGAAAATAAAAAGAGCATCGTCAATAAAGAAGCCGGGACCATTTTGGTACCAGATTGGACAAATGCAACATGCAAAAGAATTGAACTCATCTTTTCTACCATGTCCAGTAGATTCCACATCCTTAATCTCAAATTCCAGTAACCAGGGGGAGAAGGAAAAAGGGTCAATTGATTCACATCCCATTCAATCAGTATTTTTGGGATCTGATCGTCGCTACAATAGATACTGGCTTTTCCTCGGCCCTTGTAATGCTGATGATCCTGGCCACAGGAGGGTTTACTTTGAATCTTCTGAAGATGGTCACTGGGAAGTGATTGATACTGAAGAGGCCTTATGTGCCTTGCTATCAGTGTTAGATGATAGAGGGAAACGGGAGGCTCATCTCATTGAATCTCTGGAGAAGCGGCAAGCATCTCTATGCAGATTTATGTCTAGGATTAAGGTTAACAGTACTGGAATGGGTTCTATGTTGCATTCTGATCAATCTGAGCTGGATATGGTTTCAGAAGACAGTTATTCCCCGGTATCTGATGTAGACAATCTGAATCTGATTGAGACTGCAAAAGACACACTACCTTCAGCAGGGGCTGTGATTATTGAAGCTGGAAAGAAGGGTGAGGAACAAGTGCAAAAGTGGCTCCGTGCTCAAGGATATGATTCTTGGATTTGGGGATCCTTTTATTTAGATCTTAACGTTGTAAAATATGGTAGAAGGTCTTATCTTGATTCTCTAGCGAAATGTCTGACTTGTCATGATCTTTATTGGAGAGACGAGAGACACTGCAGGATTTGCCATACCACATTTGAGCTTGATTTTGATCTAGAAGAGAGATACGCCATTCACAGAGCTACATGCTGTCAGAAAGAGGATGTTAATACATTTCCAAATCATAAAGTTCTATCATCACAGATTCAATCACTGAAAGCTGCAATTTATGCTATTGAGTCTGTTATGCCTGAAGATGCCTTAGTAGGTGCTTGGAGGAAATCTGCTCATAAGCTATGGGTTAAACGACTCAGGCGCACTTCATCTTTAGTTGAGCTTTTGCAGGTTCTCTCTGATTTCGTTGGTGCAATAAACAAGCACTGGCTGTTTGAGTGCAACTTACCAGATAAAGTTGTTCAAGAAATCATTGCATATTTTGCATTAATGCCCCATACATCATCAGCCCTTGCTCTTTGGTTGGTGAAGTTAGATGCCATAATTGCTCCCTACCTTGACAGAGGTCGTCCTCAGAAGAAGCAGGGAATCGGCAATCATGGTCATTGCTGA 3219 0.4126 METEEGENGVIVPPRSGAGKSLFGIAAAASRRMQQQQRHREKENSNAPSPSTYDMAVTGRVSRKKKHKRLQEFFTTDYDNLRSDGPPIGLEFDSLPSRSESYTPSYVEDYGPAKMRKVSKSACGSHPSFNKKTSVKKHGMGKGLMTVWRATNPYAEDLPNDFDFDSREQGTHLVSKSMVQKPVRENRRNKTQHTINKSQDKRKLSIQREMGKSNLYVTQNQSSEEKCELAVDSAIFEEGFDQISMLVDDEELEMREFRAGINMLLCSDHLAASGMFGCALCKDVLVKFPPDTVKMKKPICLQPWDSSPEIVKKLFKVFHFLYTYATVVNICPFTLDEFVQAFHDKDSVLIGKTHIALLSLLLSDIEVELTNGFSPHLNKSCNFLALLHSVESQEYSVDCWRSSLNALTWVEILRQVLVASGFGSKQGALRREALSKELNLFVNYGLHPGTLKGELFKILSERGNNGCKVSELANLKQIVELNLDGTTGDLESLICSTLSSDITLFEKISPSAYRVRMSTVTKDIDDSKSDMEDAGSVDDEINYSDTFSSDDDFENDSRGANMRKLKCVNGHKTKNNMLKVYTEIDESHPGEIWLLGLMESEYSDLKIEEKLNALAALTDLLSSGSSIRMKDPTKITADCHSSIQHGSGAKIKRASSIKKPGPFWYQIGQMQHAKELNSSFLPCPVDSTSLISNSSNQGEKEKGSIDSHPIQSVFLGSDRRYNRYWLFLGPCNADDPGHRRVYFESSEDGHWEVIDTEEALCALLSVLDDRGKREAHLIESLEKRQASLCRFMSRIKVNSTGMGSMLHSDQSELDMVSEDSYSPVSDVDNLNLIETAKDTLPSAGAVIIEAGKKGEEQVQKWLRAQGYDSWIWGSFYLDLNVVKYGRRSYLDSLAKCLTCHDLYWRDERHCRICHTTFELDFDLEERYAIHRATCCQKEDVNTFPNHKVLSSQIQSLKAAIYAIESVMPEDALVGAWRKSAHKLWVKRLRRTSSLVELLQVLSDFVGAINKHWLFECNLPDKVVQEIIAYFALMPHTSSALALWLVKLDAIIAPYLDRGRPQKKQGIGNHGHC 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03409 1072 MobiDBLite consensus disorder prediction 175 202 - -
Arst3g03409 1072 MobiDBLite consensus disorder prediction 1 64 - -
Arst3g03409 1072 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 711 784 IPR028941 -
Arst3g03409 1072 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 590 628 IPR028942 -
Arst3g03409 1072 ProSiteProfiles DDT domain profile. 308 367 IPR018501 -
Arst3g03409 1072 PANTHER HOMEOBOX PROTEIN SIX 199 1059 - -
Arst3g03409 1072 MobiDBLite consensus disorder prediction 181 202 - -
Arst3g03409 1072 Pfam DDT domain 311 364 IPR018501 -
Arst3g03409 1072 Coils Coil 26 46 - -
Arst3g03409 1072 SMART testlast3 308 367 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03409 Arst-Chr3 83070741 83077928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03409 228 712 Homeobox Transcription Factor Family AT5G44180 28.235 3.96e-46 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Arst3g03409 WSD 2.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03409 - - gmx:100802783 1515.75