Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03386 ATGTTCATAAACGAGGATGATGTGAAGAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGATTGCAGAAGATGATGCTGAAGACGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCTTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGCATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGGTGGAGGAATGTGAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTATGGCTACGGTATATGGAAGGTATCATGTTTTGTGGAATCTCACAACCATGATCTGACGCCACCCCCAATTTGCGCATCTGGTTCCGGCCAATCGTCGTCTCACTGTCACTGA 525 0.4438 MFINEDDVKNDSDNDLGDDFDYQPIAEDDAEDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVRDNQGSIISRQLVCNKEGWRNVRSREARSLTRTKCPARLRVKLDYGYGIWKVSCFVESHNHDLTPPPICASGSGQSSSHCH 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03386 174 MobiDBLite consensus disorder prediction 11 39 - -
Arst3g03386 174 MobiDBLite consensus disorder prediction 1 42 - -
Arst3g03386 174 Pfam FAR1 DNA-binding domain 74 157 IPR004330 -
Arst3g03386 174 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03386 Arst-Chr3 80247248 80249377 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst3g03386 FAR1 6.7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03386 - - adu:107488504 286.189