Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03383 ATGGGAAGGAAGTGCTCACATTGTGGGAACGTAGGGCACAATTCAAGAACATGCACTTCTTCTTCGTTTCTTGGAATCCGTCTATTTGGAACCCACCTTCTAGCAGATCCCTCCTCCTCCTCCTCCTCCCCCGCGACGATGATGACGATGAACAACAAGTACTTTAGCATGGACTCGTTAACATTATTCCCCACTACTACTACTACTACTACTACTACTGCTGCTATTGGTTATCTATCAGATGGAGCTCCACCTCAAGACAAGAAGAAAGGGGTAGCATGGACGGAAGAGGAGCACAGAAGATTCCTGGTTGGGCTTGAGAAGCTGGGGAAGGGAGACTGGAGGGGCATTTCTAGAAACTTCGTAACCACCAGAACACCGACTCAAGTTGCCAGCCATGCTCAGAAGTATTTCCTCCGTCTTGCTAATACCGTAAACCACAACAAACGCCGTTCAAGTCTCTTTGACACAAACAATACTCCTCCTACTACTGCTGCTGCTGCTGCTGCTACATTGTCATTTCACTTTCTTGAACAACAACAAACCATCAACAACAGCAATAAGCCGTTGTTATCAACAGAAACTACTTCTGAATCCTCCTCCTCCTCTTCCTCCTCCTCCTCTATGTATAATAATAGTGTGCCACCACCGGATCTGGACCTCACTCTTGCACCGCCGCCACCACCTAACTCCTCCTCATGCTTCCCCCAATTATAA 717 0.4742 MGRKCSHCGNVGHNSRTCTSSSFLGIRLFGTHLLADPSSSSSSPATMMTMNNKYFSMDSLTLFPTTTTTTTTTAAIGYLSDGAPPQDKKKGVAWTEEEHRRFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLANTVNHNKRRSSLFDTNNTPPTTAAAAAATLSFHFLEQQQTINNSNKPLLSTETTSESSSSSSSSSSMYNNSVPPPDLDLTLAPPPPPNSSSCFPQL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03383 238 PANTHER TRANSCRIPTION FACTOR KUA1 3 208 - -
Arst3g03383 238 CDD SANT 93 138 IPR001005 -
Arst3g03383 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 142 IPR017930 -
Arst3g03383 238 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Arst3g03383 238 ProSiteProfiles SANT domain profile. 94 142 IPR017884 -
Arst3g03383 238 MobiDBLite consensus disorder prediction 185 238 - -
Arst3g03383 238 SUPERFAMILY Homeodomain-like 88 143 IPR009057 -
Arst3g03383 238 NCBIfam myb-like DNA-binding domain, SHAQKYF class 89 140 IPR006447 GO:0003677
Arst3g03383 238 Pfam Myb-like DNA-binding domain 93 138 IPR001005 -
Arst3g03383 238 Gene3D - 92 143 - -
Arst3g03383 238 SMART sant 90 140 IPR001005 -
Arst3g03383 238 MobiDBLite consensus disorder prediction 185 215 - -
Arst3g03383 238 MobiDBLite consensus disorder prediction 219 238 - -
Arst3g03383 238 FunFam transcription factor MYB1R1 92 143 - -
Arst3g03383 238 ProSiteProfiles Myb-like domain profile. 86 138 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03383 Arst-Chr3 79968706 79969633 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst3g03383 Myb_DNA-binding 7.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03383 - - adu:107479628 387.882