Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03341 ATGGAAGCTAGTACCGGGCTTTTTGCTGCGACCCATGACAACAATGATCTTGTGGTCATTCAAGGACACAACGAGCCAAGGCCTGTGAAGAACTTAGATGGCCAACTATGTGAAATATGCGGTGACTTAGTGGGACTAACTGTGGACGGAGACTTGTTTGTAGCTTGCGAGGAATGTGGGTTTCCCGTGTGTAGGCCTTGTTACGAGTACGAAAGAAGGGAAGGGACTCAAGTTTGCCCCCAGTGCCATACAAGATACAAGCGTATCAAAGGAAGCCCAAGAGTAGAGGGAGACGAAGACGAAGACGATGTGGATGATATAGAACATGAATTCAAAATGTTGGAAGAAAAGGAAGAGTTGCGGCAAAGGAAGAAGAGTAGCGGATATGATAATGAGAATGCTAAATCAGCATCCTTGGCCAAGTCTAAATCCGAAAATTTTGAACGTCTTCGTGATGTAGGCTATGAAAAATTTGCTGACAAAGAGAGAGCAGATGACTGGAAGTTAAACCAAGGAAATCTATGGCCTGAAACTGAGGCTACAGTTGATCCCGAAAAGGCTATTAAAGATGAAAGTAGACAGCCACTCTCAAGAAAGGTGGCGATACCATCCGGAAGACTCAGCCCTTACAGGATGATGGTTGCAGCGAGGCTTGTGATTCTCTTGCTATTCTTTCAATACAGAATCTTCCACCCAGTACCTGAAGCAATTGGACTCTGGTTCACATCTGTGGTGTGTGAAATTTGGCTAGCATTGTCATGGCTGGTTGACCAACTTCCTAAATGGTTTCCCATTGATCGCCAGACGTATATTGATCGTCTCTCAATCAGATTTGAACCGGAGGACAAGCCGAATATGCTTTCTCCAATAGATATATTTGTCACTACAGTGGATCCAACGAAGGAACCTCCTCTAGTTACAGCCAATACTGTTCTTTCAATCTTGGCGCTAGATTACCCAGTTGACAAAATCTCATGTTACAGAGAATATGAAGAATTTAAGGTGAGGATTAATGCACTTGTGGCCAAGTCCATGAGAGTTCCAGCAGAAGGGTGGACAATGAAAGATGAGACACCGTGGCCGGGAAACAACACCAACGATCATCCAAGTATGATACAAGTCCTTATTGCTCGAGGCGGAGACCACCACCCCGACCAACTTCCCTGTCTTGTATACATATCTCGTGAGAAAAGGCCGGCATTCCAACACCACAACAAAGCTGGTGCCATAAATGCCTTGCTTCGAGTATCAGCAGTGCTAAGCAATGCTCCCTTCGTGCTGAACTTGGATTGCAATCATTATGTTAATAACAGCAAAGTCGTGCGTGAGGCCATGTGTTTCTTTATGGACATCCAACTTGGGAATGGCATTGGCTTTGTTCAGTTTCCTTTAAGATTTGACAGCCTTGACAGGAACGATCGTTATGCCAACAAGAACACTGTTTTGTTTGATATTAACCTAAGGTGCCTAGATGGAATTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCAAAACCGCCGCGAATTGTTCATGCACTCAAAACAGGATGAAAATGAAGAGGAAGATGCAGGAATAATAGAAGAAGACAAGCAGCTACTGAAATCAGAGATGAATTTTGAGAACAGATTTCAAAAATCACATTTTGCTAATTCTTCATCAACAGAAGAAGGTGGCGTCGATGCTTCTTCCGGTCAGGCGGCCCTGCTCAAAGAAGCCATTCATGTCATGAGCTGCAAATATGAAGACAGAACTCTGTGGGGATATGAGGTTGGCATGAGCTATGGATCTATAGCTGCAGATACTCTTACGAGTTTCAAGTTGCATAGTCGAGGCTGGGAATCGGTATATTGCATGCCGAAGAGAGCTGCATTCAGGGGGACAGCTCCTATCAACCTTACAGATAGACTTAACCAGGTGCTTAGATGGGCGGTGGGATCACTTGAGATCCTCTTCAGCCGCCATTGCCCGCTGTGGTACGGCTTCAACGAAGGAAAACTGAAGACGCTTCAAAGGGTTGCCTATATTAACAGCACTGTCTACCCCTTCAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTGCTTGCTCACTGATAAATTTATCACACCTTCGGTAGGGACATTCGCAAGTCTAGTCTTTATTAGTCTATTCATCACCATCTTTGCATCGGCCATCCTCGAATTGAGATGGAGTGGTGTTAGCCTTGAGGAATGGTGGAGGAATCAGCAATTCTGGGTCATCGGAAGTGTGTCTGCACACATGTTCGCAGTTGTACACAGCCTCATGAAAGCCCTGCCCCTGGTAAGAAGCAATATCAACTTCATCACCGTATCGAAGGCGCCAGACGAAGGGCAGTTCCACCAGCTGTACACCATCAAATGGACTGCTCTCCTTATACCTCCAACTACAATCATAATAATCAACCTCATTGGCATTGTAGCTGGTTTCACAGATGCCATAAACAGTGGTGGACATTCTTGGGGAGCACTTCTTGGGAAGCTCTTCTTCTCTTTGTGGGTTATTGTTCATTTGTACCCATTCCTTAAAGGCCTCATGGGTAGGCAGAACCGAACACCAACGCTTATAGTCATATGGTCGGTGCTTTTGGCTTCTATCTTCTCCTTGGTTTGGGTAAGGATTGACCCTTTTGTGTTGAAAACAAAAGGACCAGACGCTAAGCAATGTGGAATCAGTTGTTGA 2826 0.4222 MEASTGLFAATHDNNDLVVIQGHNEPRPVKNLDGQLCEICGDLVGLTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCHTRYKRIKGSPRVEGDEDEDDVDDIEHEFKMLEEKEELRQRKKSSGYDNENAKSASLAKSKSENFERLRDVGYEKFADKERADDWKLNQGNLWPETEATVDPEKAIKDESRQPLSRKVAIPSGRLSPYRMMVAARLVILLLFFQYRIFHPVPEAIGLWFTSVVCEIWLALSWLVDQLPKWFPIDRQTYIDRLSIRFEPEDKPNMLSPIDIFVTTVDPTKEPPLVTANTVLSILALDYPVDKISCYREYEEFKVRINALVAKSMRVPAEGWTMKDETPWPGNNTNDHPSMIQVLIARGGDHHPDQLPCLVYISREKRPAFQHHNKAGAINALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQLGNGIGFVQFPLRFDSLDRNDRYANKNTVLFDINLRCLDGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCQNRRELFKXHSKQDENEEEDAGIIEEDKQLLKSEMNFENRFQKSHFANSSSTEEGGVDASSGQAALLKEAIHVMSCKYEDRTLWGYEVGMSYGSIAADTLTSFKLHSRGWESVYCMPKRAAFRGTAPINLTDRLNQVLRWAVGSLEILFSRHCPLWYGFNEGKLKTLQRVAYINSTVYPFSXXXXXXXXXXXXXXXXXXXXXXICLLTDKFITPSVGTFASLVFISLFITIFASAILELRWSGVSLEEWWRNQQFWVIGSVSAHMFAVVHSLMKALPLVRSNINFITVSKAPDEGQFHQLYTIKWTALLIPPTTIIIINLIGIVAGFTDAINSGGHSWGALLGKLFFSLWVIVHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRIDPFVLKTKGPDAKQCGISC 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03341 942 Coils Coil 532 535 - -
Arst3g03341 942 Coils Coil 97 117 - -
Arst3g03341 942 MobiDBLite consensus disorder prediction 115 137 - -
Arst3g03341 942 FunFam Cellulose synthase 19 110 - -
Arst3g03341 942 CDD mRING-HC-C4C4_CesA 35 85 - -
Arst3g03341 942 MobiDBLite consensus disorder prediction 115 130 - -
Arst3g03341 942 Coils Coil 493 493 - -
Arst3g03341 942 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 328 909 - -
Arst3g03341 942 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 279 496 IPR029044 -
Arst3g03341 942 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Arst3g03341 942 SUPERFAMILY RING/U-box 22 105 - -
Arst3g03341 942 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Arst3g03341 942 Pfam Cellulose synthase 540 936 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst3g03341 942 Pfam Cellulose synthase 290 327 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst3g03341 942 Pfam Cellulose synthase 328 494 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03341 Arst-Chr3 76615745 76623551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03341 315 942 Cell Wall Biosynthesis AT5G17420 60.062 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03341 K10999 - rcu:8270711 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03341 3 76615745 76623551 Arst1g02980 1 91519463 91524536 PCT