Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03300 ATGCAGGATCGTTCCAACGCAGCTGCCCTCCCATCTACGATCACGGCGCCGCCCTCTCATCTGCACACAACGCAGCACGGCTGCCCCATGCAGGATCTTTCCAAAGCAGCCGCCCTCTCATCTACGATCGATAGGGCCGCCATCTCATCTGCACACAACACAGCCGGTGTTCACTCCTTCAGAATGGCAGAATCGCAAGAAGAACGTGCTGCAATGGAGGGTCCTCATTTATGCACATCACCTAGCCGAAATTCATTAATGGAGGTTGATATAGTTGAACCGTTAGTTTGTGTTGCCTCTGAAGTTTCTGAAAATTTATCAAACGAACAAGAAAACTTAGCCGCCAATGTCGCAGAGCATGGTCACAAGTTAAACAAGTTGTCGGATGTTATGGATGTTGGAAGTGAAGAGATGGAGCCTGGTGATGAGTTACCAGATCATGGTAACCTACAAGAAGATGAGATACCAAGAGTTGGAATGCGATTTCCTCAGCTACAGATGGCGCATGACTTTTATGTGTCCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACGACAACATTTGACAAGATCACAAAGGCTCCCATTAACCAGGCTATACACTGTAATCGCGATGGGATCCGCGAGTCTCGTGTTAAAGCACCAACACGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATCTAAAGTTTGATAAAGACGTGCAAGACTGGGTTCTGCTCAAGGCTGACTTGACGCACTCTCACCCTTGTTCACCGAAGAAGGCAGTGCACTATCATGAGTATAGGCAGTTGACCATGCATGCGAAGTGCGTGATCGAGGATAATGATGAGGCTGGGATTCGACCAAACAAGACATTCCTTGCTTTGTCAAATGAGGCTGGTGGCCCCTCTAACTTGGGATTCTCAGAGAAGGATTTAAGAAATTATATAACAGCAAGGCTCCGAAGTAGCAACGTTAATGCGGATGTCAGGGAGATGATGAGCTACTTTAGGAGAATGAAGGACATCAATCCGAACTTCTTTTACGCGGTGAAGTTGGACGATGAGTGTAAATTTAAGAGTGCAGTATGGGTTGATGCAAGGTGTAGGGCGTCGTATGAATACTATGGAGACGTCGTGTCAGTTGATAGCACGTACAATAGAAATAGGCATGGATTACCGTTTGTGTCGTTCGTTGGGGTCAACCACCATGATCTGTATGATGACCGACGCATGTGGGTCCCAATATACTTCAAGGGTGAATTTTGGACAGGAATGCGGAGTACGCAAAGGAGTGAGAGCATGCACGCATTCTACGGTGGATACTTACACAGTAAAACTAGCTTGGTCCAATTTGTTCATGAATATGACAATGTGCTTGGAGTCAAGGAGCAGAGGGAACTGGAGGATGATGCTGCAGACTCGAGGGGGGTTATCCCTTGTGCAACTACCTCGCCTATAGAGAAACAGTTTCAGCAAGAGTATACCACGAGCATTTTTAGGGATGTTCAAATTGAGTTTGTGAGGAAGGCTAACTGCAGAGTTTCTACAGTTGATGAACAGGGTCCAGTGGTCTGCGTGAAGGTGGAAGAGGAGAAACTACTCAACGATACTATTCTATGCGTTCCGTATGATGTTCACTTTGACCGTTCCACACATGAGCTTCGTTGTGAATGCAATCTTTTTGAGAGTTCAGGTGTGTTATGCTGTCACTGCCTTGAAGTTTTACATTCGTATAAAGTGTACAAAGTACCGTCCTGTTATATTCTGCCTCGATGGAGCAAGAAGATAAAGCGCAAGCATACGTATGTCAAAAGTAGCCATGATGTCAGTCGGTCAGATGAGAGTCATGTTGCATTTAGGAAACTGTGTGCACACTTCTATAATGTTGCTCAAGAGTTCCTCGGTGATGATGAAGAAACAGCATTGCTGCATCTTGCTTTGGAAGAAACAAGGGCCAAGTTGGCTACGCACCGTGCCAAAAAGAGGTCCGAGAGCATGGCAGAGACTCAGACCAACATTGGCTCTCAGAGTTCGAATGATGTCGGTGTTGATGACATCCAAGGCCCATCGAAGGTCACCACAAAAGGCAGGCCAAAGAGTAAGAGGCTTGGCTCTGCCCTTGAGAAGTCCATCAAGAATTCAAGACGGAGAAAACAAAAGAATTCACATCCGGTGGTTCGTCCGCACACATTTCAAGATATAAACCATTGTGATGTTTCTAGCCTGGATGTTCCCAAACAAGACGGTGGTTTCATGTCTTTGTTAAGCTCCTTCAACCAAAAATGGGATTAG 2292 0.4599 MQDRSNAAALPSTITAPPSHLHTTQHGCPMQDLSKAAALSSTIDRAAISSAHNTAGVHSFRMAESQEERAAMEGPHLCTSPSRNSLMEVDIVEPLVCVASEVSENLSNEQENLAANVAEHGHKLNKLSDVMDVGSEEMEPGDELPDHGNLQEDEIPRVGMRFPQLQMAHDFYVSYAKKAGFATKIRTTTFDKITKAPINQAIHCNRDGIRESRVKAPTRKNTISAAGCKARIYLKFDKDVQDWVLLKADLTHSHPCSPKKAVHYHEYRQLTMHAKCVIEDNDEAGIRPNKTFLALSNEAGGPSNLGFSEKDLRNYITARLRSSNVNADVREMMSYFRRMKDINPNFFYAVKLDDECKFKSAVWVDARCRASYEYYGDVVSVDSTYNRNRHGLPFVSFVGVNHHDLYDDRRMWVPIYFKGEFWTGMRSTQRSESMHAFYGGYLHSKTSLVQFVHEYDNVLGVKEQRELEDDAADSRGVIPCATTSPIEKQFQQEYTTSIFRDVQIEFVRKANCRVSTVDEQGPVVCVKVEEEKLLNDTILCVPYDVHFDRSTHELRCECNLFESSGVLCCHCLEVLHSYKVYKVPSCYILPRWSKKIKRKHTYVKSSHDVSRSDESHVAFRKLCAHFYNVAQEFLGDDEETALLHLALEETRAKLATHRAKKRSESMAETQTNIGSQSSNDVGVDDIQGPSKVTTKGRPKSKRLGSALEKSIKNSRRRKQKNSHPVVRPHTFQDINHCDVSSLDVPKQDGGFMSLLSSFNQKWD 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03300 763 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 152 403 IPR031052 GO:0006355
Arst3g03300 763 MobiDBLite consensus disorder prediction 666 684 - -
Arst3g03300 763 MobiDBLite consensus disorder prediction 1 27 - -
Arst3g03300 763 ProSiteProfiles Zinc finger SWIM-type profile. 543 579 IPR007527 GO:0008270
Arst3g03300 763 MobiDBLite consensus disorder prediction 656 731 - -
Arst3g03300 763 Pfam FAR1 DNA-binding domain 170 257 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03300 Arst-Chr3 72368785 72372693 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst3g03300 FAR1 2.7e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03300 - - adu:107476090 1442.94