Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03276 ATGACGTCACGTCCAGATAATGGTGGTCATGCGACCAACAGCGGAAGGACACGTGTCGGCAAGTACGAGCTGGGTAGGACGCTAGGCGAGGGGAATTTCGCGAAAGTGAAGTTTGCGAAGAACACGATCACCGGAGACAATGTCGCCATTAAGATTCTCGACAAGGAGAAAGTTCTCAAGCACAAGATGATCAACCAGATAAAACGAGAGATATCAACAATGAAACTGATTAGACACCCTAATGTAATACGTATGTATGAGGTCATGGCTAGCAAGACAAAAATATACATTGTATTGGAATTTGTAACTGGTGGAGAGCTCTTTGATAAAATTGCAAGCAGTGGGAGATTGAAAGAAGAAGAAGCTAGAAGATATTTTCAACAGCTAATATGTGCTGTGGATTACTGTCATAGTAGAGGTGTTTGCCATAGAGACCTAAAGCCTGAGAACTTGTTGCTGGATGCTACGGGAATGCTCAAAGTATCAGATTTTGGATTGAGTGCACTGCCTCAACAAGTTCGGGAAGATGGGCTGCTTCATACAACATGTGGTACGCCAAATTATGTTGCCCCAGAGGTGGTTCACAATAAAGGCTATGATGGTGCGAAGGCTGATCTCTGGTCATGTGGTGTCATTCTTTTTGTTTTGATGGCAGGCTATTTGCCCTTTGAAGACAACAATCTTGTGAATTTGTATAAAAAGATTTTCAAGGCTGAGTTCACTTGTCCTCCTTGGTTTTCTACGAATGCAAAGAAGTTAATCATAAGAATACTTGAACCTGATCCTGCCAAAGTATGCTATTGA 804 0.4229 MTSRPDNGGHATNSGRTRVGKYELGRTLGEGNFAKVKFAKNTITGDNVAIKILDKEKVLKHKMINQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASSGRLKEEEARRYFQQLICAVDYCHSRGVCHRDLKPENLLLDATGMLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVVHNKGYDGAKADLWSCGVILFVLMAGYLPFEDNNLVNLYKKIFKAEFTCPPWFSTNAKKLIIRILEPDPAKVCY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03276 267 Pfam Protein kinase domain 22 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g03276 267 SMART serkin_6 22 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g03276 267 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 17 264 - -
Arst3g03276 267 CDD STKc_SnRK3 21 264 - -
Arst3g03276 267 FunFam Non-specific serine/threonine protein kinase 13 101 - -
Arst3g03276 267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Arst3g03276 267 PIRSF ILK 10 265 - -
Arst3g03276 267 ProSiteProfiles Protein kinase domain profile. 22 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g03276 267 Gene3D Transferase(Phosphotransferase) domain 1 13 265 - -
Arst3g03276 267 SUPERFAMILY Protein kinase-like (PK-like) 19 264 IPR011009 -
Arst3g03276 267 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Arst3g03276 267 FunFam Non-specific serine/threonine protein kinase 15 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03276 Arst-Chr3 70495038 70499510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03276 11 262 CBL-interacting serine-threonine protein kinases AT1G01140 78.571 4.55e-152 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Arst3g03276 Pkinase 1.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03276 - - zju:107414012 471.085