Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03274 ATGACGTCACGTCCAGATAATGGTGGTCATGCGACCAACAGCGGAAGGACACGTGTCGGCAAGTACGAGCTGGGTAGGACGCTAGGCGAGGGGAATTTCGCGAAAGTGAAGTTTGCGAAGAACACGATCACCGGAGACAATGTCGCCATTAAGATTCTCGACAAGGAGAAAGTTCTCAAGCACAAGATGATCAACCAGATAAAACGAGAGATATCAACAATGAAACTGATTAGACACCCTAATGTAATACGTATGTATGAGGTCATGGCTAGCAAGACAAAAATATACATTGTATTGGAATTTGTAACTGGTGGAGAGCTCTTTGATAAAATTGCAAGCAGTGGGAGATTGAAAGAAGAAGAAGCTAGAAGATATTTTCAACAGCTAATATGTGCTGTGGATTACTGTCATAGTAGAGGTGTTTGCCATAGAGACCTAAAGCCTGAGAACTTGTTGCTGGATGCTACGGGAATGCTCAAAGTATCAGATTTTGGATTGAGTGCACTGCCTCAACAAGTTCGGGAAGATGGGCTGCTTCATACAACATGTGGTACGCCAAATTATGTTGCCCCAGAGGTGGTTCACAATAAAGGCTATGATGGTGCGAAGGCTGATCTCTGGTCATGTGGTGTCATTCTTTTTGTTTTGATGGCAGGCTATTTGCCCTTTGAAGACAACAATCTTGTGAATTTGTATAAAAAGATTTTCAAGGCTGAGTTCACTTGTCCTCCTTGGTTTTCTACGAATGCAAAGAAGTTAATCATAAGAATACTTGAACCTGATCCTGCCAAACGGATTACGATCGCTGATGTAATTGAGAATGAATGGTTCAAGAAGGGATACAAGCCTCCAAAATTTGAGCAGGCCAATGTTAGTCTTGATGATATAGATTCTATTTTTAGTGAATCAATGGGACTTGTTAAAAGGGAAACAAGATTCACATCCAAATGTTCAGCAAATGAGATCATTACGAAAATTGAGGAAGCTGCTGGGCCTTTGGGTTTCGGTGTTAAGAAGAGCAACAATAAGTTAAAGATTCAAGGTGAAAAGACTGGGCGTAAAGGTCAACTATCTGTAGCTACCGAGATTTTTGAGGTGGCTCCTGAACTTTATGTGGTTGAATTGCGGAAGGCTGAGGGAGATACTCTGGAATTTCACAAATTCTATAAAAACCTCTCTCCTGCACTGAAAGATATTGTTTGGAAAGCAGAGCCAATCGATGAAGAAAAAGATGGTTCCAGTCCCTCAAAATAA 1254 0.4131 MTSRPDNGGHATNSGRTRVGKYELGRTLGEGNFAKVKFAKNTITGDNVAIKILDKEKVLKHKMINQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASSGRLKEEEARRYFQQLICAVDYCHSRGVCHRDLKPENLLLDATGMLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVVHNKGYDGAKADLWSCGVILFVLMAGYLPFEDNNLVNLYKKIFKAEFTCPPWFSTNAKKLIIRILEPDPAKRITIADVIENEWFKKGYKPPKFEQANVSLDDIDSIFSESMGLVKRETRFTSKCSANEIITKIEEAAGPLGFGVKKSNNKLKIQGEKTGRKGQLSVATEIFEVAPELYVVELRKAEGDTLEFHKFYKNLSPALKDIVWKAEPIDEEKDGSSPSK 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03274 417 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g03274 417 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 17 397 - -
Arst3g03274 417 Pfam NAF domain 298 339 IPR004041 GO:0007165
Arst3g03274 417 CDD CIPK_C 302 398 - -
Arst3g03274 417 FunFam Non-specific serine/threonine protein kinase 292 401 - -
Arst3g03274 417 Gene3D Phosphorylase Kinase; domain 1 11 101 - -
Arst3g03274 417 CDD STKc_SnRK3 21 276 - -
Arst3g03274 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Arst3g03274 417 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g03274 417 FunFam Non-specific serine/threonine protein kinase 13 101 - -
Arst3g03274 417 FunFam Non-specific serine/threonine protein kinase 15 316 - -
Arst3g03274 417 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g03274 417 Gene3D Transferase(Phosphotransferase) domain 1 102 284 - -
Arst3g03274 417 Gene3D Kinase associated domain 1, KA1 291 402 - -
Arst3g03274 417 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Arst3g03274 417 SUPERFAMILY Protein kinase-like (PK-like) 19 289 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03274 Arst-Chr3 70491962 70499510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03274 11 410 CBL-interacting serine-threonine protein kinases AT1G01140 66.063 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Arst3g03274 Pkinase 4.9e-74 CL0016