Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03203 ATGAAGCAGTCTTTTGATCCTTCATCTTTGGGTCCTTCAAAGATTCCATCGATAAATATACCTAGAGGAGTGGGGTGCAGTGCACGAGGGGTTTCATCTGGATCTGATTTATACCATGCGTCATCTGATGCTAGTCTCTTTTCCAGTTCATTACCTGTTCTTCCACACGAAAAGTTGAACATAAATGATACTGAAAATGGTTATCAATCTGTTGATGACATCTCATCTGGCTTTGAAAAGCTTCAAGACAAGGGTTCATTAGAAGGTGTCGGTGCTCATGCAGTGGGAACCACGCTTCCTGATGATGAAGACGAGCTTTTGGCTGGCATAATGGATGATTTTGATCTAAGTGGTTTACCTGGTTCTCTTGAGGACTTGGAAGAGTATGATCTTTTTGGAGATATGGATCTAGATCCTGATCAGGATGGTTTCAGTGCGGGCATGTCCAAATTGAACTTCTCCGATAGTGTTGTTAGCAACGGTTTGCCTCATTATTCTTTTCCTAATGGTGTTGGAACTGTTGCTGGAGAACATCCATATGGAGAGCATCCTTCTCGAACGCTATTTGTTCGAAATATTAACAGCAACGTGGAGGATTCAGAGCTGAGAGCTCTTTTTGAGCAATATGGTGATATTAGAACCCTCTATACTGCATGTAAACATCGGGGTTTTGTAATGATATCCTATTATGACATCCGTGCTGCTCGAACAGCTATGCGTGCATTACAAAACAAACCTCTGCGGCGCAGGAAACTTGACATACATTTCTCAATACCGAAGGATAACCCATCAGACAAGGATATCAACCAAGGAACCTTGGTGGTTTTCAATTTGGATCCATCTGTTTCAAATGAAGACCTCCGTCAAATATTTGGGGCTTATGGAGAAGTCAAAGAGATAAGGGAAACTCCTCACAAGAGGCATCATAAGTTCATTGAATATTATGATGTCAGAGCTGCAGAAGCAGCACTAAAATCATTAAATAGAAGTGACATAGCTGGTAAACGGATAAAGCTGGAGCCTAGTCGGCCTGGAGGAGCTCGTCGAAATTTATTGCTCCAACTAAATCAAGAGCTTGATCAAGATGAAGCTCGGAACTTTCGGTATCAAGTGAGTTCACCTGTGGCCAACTCTCCACCAGGTAACTGGATGCAGTTCAATAGTCCTGTCGAGCAGAATTCTATGCAAACGATCAGTCATTCTCCTGGCTCTAGGATCATGAGCCCAACAACTGGTAGCCACTTGCCAGGGCTGGCTTCAATTTTGCAACCTCAGGTATCGAATACTGTGAAGGGTGCAACTATTGACAAGGACTTTGGAAGGAGCAATCATGGAGAGCACATTTTTACCAGTGTGAATTCAACGCAAGGAGCTACTTTTCAGTCACATTCACTTCCAGAGCCCAAATTCAGCCAATATCGTGGATCTTTGTCCTTGTTTGGTCCATCAACATCAAAATCAAATGAATCTTCGATGGAGACCTTATCTGGGGCACAGTTTTTATGGGGAAGTCCAACCCTTTACTCGGAACGTAATAAGCCTTTAGCTTGGCCAAGACCAGCTGCGGTGCATCCATTTACATCAAATGGCAAGGGGCATGGCTTCCCATACTCAAGTCAAAGTACTTCCTACGTTGGGGCATCCCACCATCATAACAATCATCATGTTGGTTCTGCTCCATCAGGTTTGCCACTAGAGAGGCACTTTGGTTTTCCTGAGTCACCTGAAACTTCGATCATGAATAATGTCGGTTATGGAGGCATGGGTCTGGGGCACACTGATGGAAATTACGTGGTTAAAACGAGTGGGTCTGTAAATGCTGGCATTACTATTCCGAGAAATATTTCTGAGAACGGTTCATCAAACCTTAGAATGAGATCTTCTCCTAGGCTTAGCCCTGTGTTTTTGGGTAGTGGTCCATATGCAGGACTACCACCTACCACCATGGATAGTTTGACCGACCGTTCTCAGAGCAGATGGATTGAGAACAATGGAAGCCAAGTTGATAGCAAGAAGCAATTCCAGCTTGATTTGGATAAGATTAAATGTGGTGAAGATACAAGGACTACATTAATGATAAAGAATATTCCAAATAAGTACACGTCAAAAATGTTATTAGCTGCCATTGATGAAAATCACAAGGGTACATATGATTTTCTCTATCTCCCAATTGACTTTAAGACATTCAATGGGAAGAAATGGGAGAAGTTTAATAGTGAAAAGGTTGCATCTTTGGCATATGCTCGAATACAAGGGAAGACTGCACTTGTGAGCCATTTCCAAAATTCAAGTTTGATGAACGAAGACAAGCGCTGCCGCCCAATTCTCTTCCATTCAGATGGTCCTGAAACCAGTGATCAGATCATGCAAGAGCATCTTCCCTCCAGCATTTTGGAATGTTCAGGCACTTAA 2412 0.4279 MKQSFDPSSLGPSKIPSINIPRGVGCSARGVSSGSDLYHASSDASLFSSSLPVLPHEKLNINDTENGYQSVDDISSGFEKLQDKGSLEGVGAHAVGTTLPDDEDELLAGIMDDFDLSGLPGSLEDLEEYDLFGDMDLDPDQDGFSAGMSKLNFSDSVVSNGLPHYSFPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLLLQLNQELDQDEARNFRYQVSSPVANSPPGNWMQFNSPVEQNSMQTISHSPGSRIMSPTTGSHLPGLASILQPQVSNTVKGATIDKDFGRSNHGEHIFTSVNSTQGATFQSHSLPEPKFSQYRGSLSLFGPSTSKSNESSMETLSGAQFLWGSPTLYSERNKPLAWPRPAAVHPFTSNGKGHGFPYSSQSTSYVGASHHHNNHHVGSAPSGLPLERHFGFPESPETSIMNNVGYGGMGLGHTDGNYVVKTSGSVNAGITIPRNISENGSSNLRMRSSPRLSPVFLGSGPYAGLPPTTMDSLTDRSQSRWIENNGSQVDSKKQFQLDLDKIKCGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDFKTFNGKKWEKFNSEKVASLAYARIQGKTALVSHFQNSSLMNEDKRCRPILFHSDGPETSDQIMQEHLPSSILECSGT 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03203 803 MobiDBLite consensus disorder prediction 1 15 - -
Arst3g03203 803 PANTHER RNA RECOGNITION MOTIF-CONTAINING 35 779 - -
Arst3g03203 803 SUPERFAMILY RNA-binding domain, RBD 183 346 IPR035979 GO:0003676
Arst3g03203 803 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 186 259 IPR000504 GO:0003723
Arst3g03203 803 MobiDBLite consensus disorder prediction 1 22 - -
Arst3g03203 803 SMART rrm1_1 187 255 IPR000504 GO:0003723
Arst3g03203 803 SMART rrm1_1 272 340 IPR000504 GO:0003723
Arst3g03203 803 Pfam RNA recognition motif 2 688 727 IPR007201 -
Arst3g03203 803 FunFam MEI2-like protein 5 isoform 2 175 269 - -
Arst3g03203 803 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 188 252 IPR000504 GO:0003723
Arst3g03203 803 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 273 338 IPR000504 GO:0003723
Arst3g03203 803 CDD RRM2_MEI2_like 270 340 - -
Arst3g03203 803 Gene3D - 270 362 IPR012677 -
Arst3g03203 803 SUPERFAMILY RNA-binding domain, RBD 690 751 IPR035979 GO:0003676
Arst3g03203 803 Gene3D - 174 269 IPR012677 -
Arst3g03203 803 FunFam Protein MEI2-like 1 270 365 - -
Arst3g03203 803 CDD RRM1_MEI2_like 185 261 IPR034453 -
Arst3g03203 803 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 271 344 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03203 Arst-Chr3 60295180 60301251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03203 181 379 Eukaryotic Initiation Factors Gene Family AT1G71770 25.333 4.35e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03203 - - gmx:100787152 1318.14