Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03182 ATGGAACAGCTGATATTGGCTGCAGAATCTGACATCAAAGAGGACTCCCCTTTGAGGCCAAAGCCAAAAAGTAATGATGCACCTGAGCCTTCTGGCAGTCCTAGAAGTAGAATGGTCTCTGCTAGATGGGATCCAGCTGAGGCATGCCGACCCATAATTGATGAAGCACCCGTGTTCTATCCTACTAATGAGGAATTTGAAGACACACTTGGTTACATAGCGAAGATACGCCCCCAAGCTGAACCCCATGGAATATGCAGGATTGTCCCTCCTGCTTGCTGGGTGCCACCTTGCCCTCTGAAGGAGAAAGATATATGGGAAAATGCTAAATTTTCCACCCGTATTCAGCAGATTGATTTGCTTCAAAACAGGGAGCCCATGAAAAAGAAAAAAAGGGGAAGGAAACGGAAACGTAGAAATCACTCCAAAATGGGAACATGCAGGAGATTGGTCAATTCAAGTTCAGGAGCTAATAGTGCTCCTGAACCTGATGAGAAATTTGGATTCCAATCAGGGTCAGACTTCACATTTAAAGACTTTCAGCTGTATGCTAATTATTTTAAGGAATGCTACTTTCGGTTAAAAGATCCTGGTGAAGATGAAAAATTTAGCAATGATAGCTACCAGAGGAGATGGCAGCCCTCAGTGGAGGAAATTGAAGGTGAATATTGGCGAATAATTGAGCAACCAACTGATGAGGTTGAGGTGTATTATGGTGCAGACTTGGAAACTGGATCAGTCGGAAGTGGTTTTCCCAAATCATCATCCTTAACTAAGAGCGACTCGAATCAATATGCCCTCTCTGGTTGGAATCTCAATAATTTTGCGCGACTACCAGGTTCGGTACTTAGTTTTGAAGGAAGTGACATCTCAGGAGTTCTTGTGCCGTGGCTATATGTTGGCATGTGCTTTTCATCATTTTGCTGGCATGTGGAGGATCATCACCTTTATTCTCTTAATTACCTGCACTGGGGTGACCCAAAAGTATGGTATGGGGTACCTGGAAACCATGCCTCAGCTTTGGAAGATACAATGAAGAAGCACTTACCTGATTTATTTGAGGAACAGCCAAATCTACTCAATGATCTGGTTACACAGTTATCTCCTTCGATTCTTAAATCTGAGGGTGTGCCTGTATATCGTACTGTCCAGCACTCTGGGGAGTTTGTTATTACTTTTCCAAGGGCATACCACTCTGGCTTCAATTGCGGCTTCAACTGTGCAGAGGCAGTGAATGTGGCTCCTGTTGATTGGCTAATGCATGGCCAGAATGCTGTTGAGCTTTATAGCTTGCAGAGTCGTAAGACATCCTTGTCGCATGACAAGCTGTTATTTGGATCAGCACAGGAAGCTGTACAGGCCCTCGCAGAACTAGCTCTTCATGGAAAAGAAACTCCAAAATGTTTGAAATGGAGAAGTGTCTGCGGGAAAGAGGGAGTTCTAACAAAGGCCATTAAGACAAGGATAAAGATGGAAGAAGAGAGGCTGGGATGTCTTCCAACACATTTGAAGTTGCTAAAGATGGACAAAGACTTCGATTCTTATGATGAAAGAGAATGCTTCTCTTGCTTCTATGACTTGCATTTATCTGCTGTGGGATGTGAGTGCTCTAGGGACATATATTCTTGTCTTAAGCACTCAAAGTTTTTATGCTCTTGCGCAATGGATAAAAGATTTGTTCTTTTTCGTTATACCATAGATGAACTAAAATCTTTGGTTGAAGCATTAGAAGGAGAATCACATGCTATTAAGGTGTGGGCAAATAAAAGGCTTGGAATGGTATCTACTGTTTCCAGTGAGGTTTGCATGTATGAACCAGATATGGAGAAAGACATGTACAAAGCAAAGAATCCCAAAGAAGAGGAGACCTCGGTAATAGGAGCCACGAATAACTCAAATTTAAATATACCTAGCAGGCCTCATAGTCATGTCACTTCAGAGATAGTTCAGTCAGAGTCTCACGATGTAACTTCTGGTGCATCATATGGAATTATAGAAAATCATAATCATAGTATTGATAAAAAGTTGGTCGCAGATAATGGACATAAAGTGGACCAGGAAGGTTCATTGGATTTGAATGTTGAAGCTGTATCAGATGGAAATGAAAATAATTTGCTGCTTAAGAGTTTCTTAACAGAGGAAAAATTATGTTGCTCCGGCTCTGGAACAAAACAAGAAAACATTGGGCTTGCTGGCGAGCATAACCTATCACAGTTTTGTGTTCTGAAGACAGAACTTTCATCATGTTCAAGTGTTGTTGCTTATTCTGGTCCATTTAATGGTGGAAAATTTGGGATAGATTCAAATTCTGGAAAGCATCCTAACTGCATGGTTAAAAGGGAAATCATTGACTCGATGAATAGAAGTATATCTTTGAGTGATGAAAGCCATCTAATGCAAGTGTTTGGTACTACTGTGAAGCTTATAAGTTTGGGATCTGTTGCTTATGGAAAACTATGGTGCACTAAGCAGGCAATATATCCAAGAGGATTCAAGAGTCTAGTTAGCTTCTTTAGCATTCTTGATCCAGCAAGAATATGTAGCTATATTTCTGAAGTTGTTGATGCTGGATTTCTTGGACCTCTTTTCAAGGTTACCCTGGAAGGTCATCCAAATGAGGTGTTCACTGATACCACAGCAGACAAGTGCTGGGAATCAATTCTAAAGAGACTACATGATGAAATCGTTAGGCAAAGGAGTCTAGGTGAACTAGAACTTCCTCCGATAGAGCTTTTGAAAAGCATTAATGGTCATAGAATGTTTGGCTTCCATTTGCCATCTGTTATTCAGGCCATTGAAGCGCAAGATCTCACTCATCAGTGTGCAGAGTACTGGAACCACAAAGGTGCCCTCACTTCACAGGGCCGCGCGATTAAAAAGTTCAAAGATGGTTCAGGTAGCTCTTCAGGTAATGGCAATACCAAAGTTTTTGGCATCAATTTAATTAAGCAGGAAGATGATGACATAGGTGGAAGTTGTCATTCCCTTGGAGAGATGCAATCAATATTACAGGGATTGCTAAAAAGGGCAAGTGCTGATGAGTTAAGCGCAATGCGTAAGTTATTCAGCTCGGACGCTTTGTGCTCCCAGTGGAGAATGACATTCTTATCCCTGATGGAGGAGATCAATAAAGCTGGTAGATAA 3144 0.4157 MEQLILAAESDIKEDSPLRPKPKSNDAPEPSGSPRSRMVSARWDPAEACRPIIDEAPVFYPTNEEFEDTLGYIAKIRPQAEPHGICRIVPPACWVPPCPLKEKDIWENAKFSTRIQQIDLLQNREPMKKKKRGRKRKRRNHSKMGTCRRLVNSSSGANSAPEPDEKFGFQSGSDFTFKDFQLYANYFKECYFRLKDPGEDEKFSNDSYQRRWQPSVEEIEGEYWRIIEQPTDEVEVYYGADLETGSVGSGFPKSSSLTKSDSNQYALSGWNLNNFARLPGSVLSFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGNHASALEDTMKKHLPDLFEEQPNLLNDLVTQLSPSILKSEGVPVYRTVQHSGEFVITFPRAYHSGFNCGFNCAEAVNVAPVDWLMHGQNAVELYSLQSRKTSLSHDKLLFGSAQEAVQALAELALHGKETPKCLKWRSVCGKEGVLTKAIKTRIKMEEERLGCLPTHLKLLKMDKDFDSYDERECFSCFYDLHLSAVGCECSRDIYSCLKHSKFLCSCAMDKRFVLFRYTIDELKSLVEALEGESHAIKVWANKRLGMVSTVSSEVCMYEPDMEKDMYKAKNPKEEETSVIGATNNSNLNIPSRPHSHVTSEIVQSESHDVTSGASYGIIENHNHSIDKKLVADNGHKVDQEGSLDLNVEAVSDGNENNLLLKSFLTEEKLCCSGSGTKQENIGLAGEHNLSQFCVLKTELSSCSSVVAYSGPFNGGKFGIDSNSGKHPNCMVKREIIDSMNRSISLSDESHLMQVFGTTVKLISLGSVAYGKLWCTKQAIYPRGFKSLVSFFSILDPARICSYISEVVDAGFLGPLFKVTLEGHPNEVFTDTTADKCWESILKRLHDEIVRQRSLGELELPPIELLKSINGHRMFGFHLPSVIQAIEAQDLTHQCAEYWNHKGALTSQGRAIKKFKDGSGSSSGNGNTKVFGINLIKQEDDDIGGSCHSLGEMQSILQGLLKRASADELSAMRKLFSSDALCSQWRMTFLSLMEEINKAGR 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03182 1047 MobiDBLite consensus disorder prediction 146 160 - -
Arst3g03182 1047 Pfam F/Y-rich N-terminus 805 853 IPR003888 GO:0005634
Arst3g03182 1047 PANTHER LYSINE-SPECIFIC DEMETHYLASE 51 754 - -
Arst3g03182 1047 ProSiteProfiles FYR domain FYRC motif profile. 858 948 IPR003889 GO:0005634
Arst3g03182 1047 SMART cupin_9 267 430 IPR003347 -
Arst3g03182 1047 MobiDBLite consensus disorder prediction 7 22 - -
Arst3g03182 1047 Pfam C5HC2 zinc finger 520 572 IPR004198 -
Arst3g03182 1047 Pfam jmjN domain 57 90 IPR003349 -
Arst3g03182 1047 Gene3D - 801 942 - -
Arst3g03182 1047 MobiDBLite consensus disorder prediction 1 41 - -
Arst3g03182 1047 SMART fyrn_3 812 856 IPR003888 GO:0005634
Arst3g03182 1047 ProSiteProfiles JmjN domain profile. 56 97 IPR003349 -
Arst3g03182 1047 Gene3D Cupin 41 414 - -
Arst3g03182 1047 MobiDBLite consensus disorder prediction 124 165 - -
Arst3g03182 1047 ProSiteProfiles JmjC domain profile. 267 430 IPR003347 -
Arst3g03182 1047 SMART fyrc_3 862 954 IPR003889 GO:0005634
Arst3g03182 1047 MobiDBLite consensus disorder prediction 127 145 - -
Arst3g03182 1047 Pfam F/Y rich C-terminus 860 946 IPR003889 GO:0005634
Arst3g03182 1047 SMART JmjN_1 55 96 IPR003349 -
Arst3g03182 1047 Pfam JmjC domain, hydroxylase 297 413 IPR003347 -
Arst3g03182 1047 SUPERFAMILY Clavaminate synthase-like 266 453 - -
Arst3g03182 1047 ProSiteProfiles FYR domain FYRN motif profile. 798 856 IPR003888 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03182 Arst-Chr3 58991724 58998705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03182 64 1043 JUMONJI Transcription Factor Family AT4G20400 47.633 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Arst3g03182 JmjC 1.6e-46 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03182 K11446 - gmx:100801775 1483.39