Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03144 ATGGAGGGTGTCACTGTGGTGAAGCCAGAGGCCGAGGAGGTTACAGGGGATGTGCAGAAAGACCGGGAATTGGTTCTAGAATCTTCTCACCCTGTTGTGGAGGACAGTGTTGATAGAGTTAGCAGCACTGACATGGAGGAACAACAGCTCCAGAACAACAACGTTGGTGATGATAACAAGTCATTGCCAGCTTCTGGATTTAATGGTGTAATTTCTAGCCCAAGCCAACTTACCATCTTCTATAATGGAAGTGTCTGTGTGTATGATGGACTCCCTGCTGACAAGGTGCATGAAATAATGCTTATTGCTGCTGCTACTGCAAAGTCAGCTGAAATGAAGAAGATTAATCCACAGTCTCCTTTTGTTTCAGCTGTTCCCACAAGGCCTTCTTCGCCACATGCAACCTCCAATAATGTCGCTTCTCCTCAGTCAATCTGCTTCCCTGCGGAGAAGAATTCCATCTGCAGGCTGCAAGAGTTCCCAATAGCACGCAGGCATTCACTGCAAAGGTTTCTTGAGAAGCGTCGAGACAGGTTGGGGAGCAAAGCCCCGTATCCTACCTTGTCAACAACAAAAATGGCTGACAACATAGAGAACAACTTCAGTGCCGACAATGCACCGGATTTGGTTAAGCGATCAGAAGAGGAGTTGCAGCCAACTGTAGCTGCCTCTTGA 675 0.4756 MEGVTVVKPEAEEVTGDVQKDRELVLESSHPVVEDSVDRVSSTDMEEQQLQNNNVGDDNKSLPASGFNGVISSPSQLTIFYNGSVCVYDGLPADKVHEIMLIAAATAKSAEMKKINPQSPFVSAVPTRPSSPHATSNNVASPQSICFPAEKNSICRLQEFPIARRHSLQRFLEKRRDRLGSKAPYPTLSTTKMADNIENNFSADNAPDLVKRSEEELQPTVAAS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03144 224 MobiDBLite consensus disorder prediction 181 224 - -
Arst3g03144 224 ProSiteProfiles Tify domain profile. 70 105 IPR010399 -
Arst3g03144 224 MobiDBLite consensus disorder prediction 184 203 - -
Arst3g03144 224 Pfam tify domain 73 104 IPR010399 -
Arst3g03144 224 MobiDBLite consensus disorder prediction 121 140 - -
Arst3g03144 224 Pfam Jas motif 161 185 IPR018467 -
Arst3g03144 224 SMART tify_2 70 105 IPR010399 -
Arst3g03144 224 MobiDBLite consensus disorder prediction 33 60 - -
Arst3g03144 224 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 45 194 IPR040390 -
Arst3g03144 224 MobiDBLite consensus disorder prediction 43 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03144 Arst-Chr3 56227656 56232393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03144 74 187 Tify Gene Family AT5G20900 51.724 6.44e-32 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Arst3g03144 tify 6.1e-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03807 1 99243278 99246870 Arst3g03144 3 56227656 56232393 PCT