Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03140 ATGGCTCTTGCTTCAAGAAAAATGCCATTACTTCGTACACCTACTTCTTCTTTCACTATCACATCTTCTGTGTTATTCTTTCTGGTGGCGGTGGCGTTTCTTGGTGGTGCTGATGGCGGTGCTTATTTCGCTGGATCAGAGTGTCTCAAAGTGACTCCTTCTGAATTTGTTGTGTCAGTGAGAGATGTGGTTGATGTTATGCAAGGGATTATGTCCATTCTAGCTGAGTTCGACAATGGCGGATTCGGTGATGATTTTCGTGTCTCTAATGCCGTTTCTGACTGTGTCGATTTGCTTGACTTGTCCTCTGATGAGCTTGATTGGTCTGTTTCCGCCACTCAGAACCCCCAAGGGAAGCATAACAGTACTGGGAACCTAAGCTCAGACTTAAGAACATGGCTAAGTGCAACACTGGCGAATCCAGAAACATGCATGGACGGATTCGAAGGCACTAATAGCATGGTTAAGGGTCTAGTTTCCACTGGCTTAGTCCAAATGATCTCACTGGTTCAGAACTTACTAACCCAAGTGGACCCGGTTCCGGATCACTCCTTCTCCACAAAACAAGGGAAGTTCCCTGCATGGGTGAAACCAAGGGATAGGAAGAAGCTTCTGGAAGCGAACAACAACGGCGTGGGCGTGTTCGCCGACGCGGTGGTGGCCGCCGATGGCACTGGGAATTACACAAAGATAATGGATGCTGTGAAAGATGCACCTAATTATAGTATGAGTCGGTATGTGATATACATAAAGAAGGGTGTTTATAATGAGAATGTTGAGATTAAGAAGAAGAAGTGGAATCTTATGATTATTGGAGATGGGATGAATAACACCGTTATTACCGGTAACCGCAGTTTTGTTGATGGTTGGACCACTTTCCGGTCAGCCACTTTTGCTGTGAGTGGTAGAGGATTCATAGCAAGAGACATCGCTTTCCAGAACACAGCAGGGCCGGCGAAGCACCAAGCAGTGGCGCTAAGATCCGACTCGGACCTTAGCGTTTACTACCGATGTGGTATCTTTGGTTACCAAGACAGCCTCTACGCCCACACAATGCGTCAATTTTACAGAGAATGCAAAATCACTGGCACCGTTGACTTCATCTTTGGCGATGCGACTGCGATTTTCCAGAACTGCCAAATCCTCGCTAAAAAAGGCCTACCGGATCAAAAGAACACCATTACGGCGCACGGCCGGAAAGAACCGACCGAGCCAACCGGTTTCTCAATACAATTTTCCAATATAACAGCAGACTCCGACCTTGTGCCATTGATCAACACTACTCACACGTACCTTGGTAGACCATGGAAGCCATATTCAAGGACAATTGTGATGCAATCTTTCATTAGTGATGTGCTGAGGCCGGAAGGGTGGCTTGAGTGGAGTGGCAATGTTTCTTTGGACACGTTGTATTATGCCGAGTACATGAATCATGGGCCCGGATCTGGGCTTTCTAACCGCGTGAAATGGCCCGGGTACCATGTCATGAATGATTCTAGCCAGGCTAGTAACTTCACTGTCACACAATTTATTGAGGGAAATCTTTGGTTACCTTCAACGGGTGTGGTGTTCACTGCTGGCTTAGGAGTTTAA 1593 0.4683 MALASRKMPLLRTPTSSFTITSSVLFFLVAVAFLGGADGGAYFAGSECLKVTPSEFVVSVRDVVDVMQGIMSILAEFDNGGFGDDFRVSNAVSDCVDLLDLSSDELDWSVSATQNPQGKHNSTGNLSSDLRTWLSATLANPETCMDGFEGTNSMVKGLVSTGLVQMISLVQNLLTQVDPVPDHSFSTKQGKFPAWVKPRDRKKLLEANNNGVGVFADAVVAADGTGNYTKIMDAVKDAPNYSMSRYVIYIKKGVYNENVEIKKKKWNLMIIGDGMNNTVITGNRSFVDGWTTFRSATFAVSGRGFIARDIAFQNTAGPAKHQAVALRSDSDLSVYYRCGIFGYQDSLYAHTMRQFYRECKITGTVDFIFGDATAIFQNCQILAKKGLPDQKNTITAHGRKEPTEPTGFSIQFSNITADSDLVPLINTTHTYLGRPWKPYSRTIVMQSFISDVLRPEGWLEWSGNVSLDTLYYAEYMNHGPGSGLSNRVKWPGYHVMNDSSQASNFTVTQFIEGNLWLPSTGVVFTAGLGV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03140 530 ProSitePatterns Pectinesterase signature 1. 242 261 IPR018040 -
Arst3g03140 530 Gene3D - 213 528 IPR012334 -
Arst3g03140 530 SUPERFAMILY Pectin lyase-like 216 527 IPR011050 -
Arst3g03140 530 Pfam Plant invertase/pectin methylesterase inhibitor 90 167 IPR006501 GO:0004857
Arst3g03140 530 SMART PMEI_2 13 176 IPR006501 GO:0004857
Arst3g03140 530 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 179 IPR035513 -
Arst3g03140 530 PANTHER PECTINESTERASE 84 518 - -
Arst3g03140 530 CDD PMEI-like_4 19 177 - -
Arst3g03140 530 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 85 174 IPR035513 -
Arst3g03140 530 ProSitePatterns Pectinesterase signature 2. 361 370 IPR033131 -
Arst3g03140 530 FunFam Pectinesterase 212 528 - -
Arst3g03140 530 Pfam Pectinesterase 217 514 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03140 Arst-Chr3 55888225 55892307 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03140 22 528 Carbohydrate Esterase AT3G43270 61.377 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03140 K01051 - gmx:100801813 785.023