Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03139 ATGGCCAGAACCCCGTTATTATTCACTTCATTGTCATTGCTTTTCACTCAGTTCCTATTCACCCCATTTGATGCTGTTCTTGGTTCAAAAGGATCACTTGAATGCCTTAAAGTTTCTCATGCCGAGTTCACTAACTCAGCGAAAGAAGTTGTTGGTGTCTTGAAAAGTGTTACATCCACTCTGCATTCTGAGTTTGTTAGAAATGGCGGCGGCTTTGTCGATGATCATCGCCTTTCGAGCGCTGTTTCGGCGTGCCTTGAGTTGATGGACTTGTCCTCCGATGAGCTCAGCTGGGTTGTGTCCGTTTCTGAAAGTCCCAAAGGCAAGCATAACGGCACTGGTAATTTGAGCTCTGATTTGAGGACATGGCTAAGTGCTGTTCTTGCCAACACGGACACATGCATGGAAGGATTAGAAGAAGGCACCACCAGCAGTGTCAATAATATAAAGAATGCAGTAACCGCTTCCATCAACAAAGTGAACACAATGGTCCAGGATCTCCTAACACAGGTGCACCCTGTTTCGTATAACAGGGTGAGCAAGAGCAAACTTGAGTTTCCTTCTTGGGCCGAATCAGAGGATCTTGAGGGTAAAAAGTTGCTAATGGCGGTGGATGCCGTGGTGGCTTTGGATGGGAGTGGGGACTACACACGTGTGAAGGATGCTGTGGAATCAGCGCCTGAGTATAGCATGAAACGTTATGTGATACACATTAAGAAGGGTGTGTATTGTGAGAAAGTTGAGATCCATAGCAAGAAGTGGAACCTTGTGATGATTGGAGATGGAATGGAGAATACCGTTATCACTGGTAACTCGAGTCGTTATTTCAATAATACCACCACATACATGACTGCAACCTTTGCTGTGGAAGGCAGAGGGTTTATAGCACAAAACATTTCCTTCCATAACACTGCAGGACCAAGAGGGAGCCAAGCAGTAGCTCTAAGATCACAATCCGATCTCTCAGTCTTCTACCGCTGCGAAATCTCCGGCTACCAAGACAGCCTCTACGCCCACTCCAACCGCCAATTCTACCGAGAGTCCATCATCACCGGCACTGTAGACTTCATCTTCGGCCGCGCCGCCGCAGTCTTCCAGAACTGCACCATACTTGCCAAGAGAGGCTTACCGGAACAAACCAACACCATAACCGCTCAAGGCGCAAACGACTCCACCTCACCCTCCGGCTTCTCCATCCAATTCAGCAACATCTCTGCACATTCTGAACTTCTACCTTTCTTGAACTGCACAAGAACGTACCTTGGGAGACCATGGAAGGAATATTCGAGAACGGTTTTCATGCAATCTTACATGAGCGAGATGGTGAGCCCGCAAGGGTGGAAAGAATGGAATGGGACGTTGTATTTGGACACTCTTTACTATGGTGAGTTCATGAATTATGGGCCTGGATCTGGGCTTTCTGAGAGAGTGAAGTGGCCAGGGTATCATGTTATCAATGACTATGATGAAGCTAGTAACTTCACGGTGGCCCAATTTATTCTGGGGGATCTATGGTTGCCATCAACGGGTGTGAATTATGCATCTGGTTTCACTAAATAG 1560 0.4705 MARTPLLFTSLSLLFTQFLFTPFDAVLGSKGSLECLKVSHAEFTNSAKEVVGVLKSVTSTLHSEFVRNGGGFVDDHRLSSAVSACLELMDLSSDELSWVVSVSESPKGKHNGTGNLSSDLRTWLSAVLANTDTCMEGLEEGTTSSVNNIKNAVTASINKVNTMVQDLLTQVHPVSYNRVSKSKLEFPSWAESEDLEGKKLLMAVDAVVALDGSGDYTRVKDAVESAPEYSMKRYVIHIKKGVYCEKVEIHSKKWNLVMIGDGMENTVITGNSSRYFNNTTTYMTATFAVEGRGFIAQNISFHNTAGPRGSQAVALRSQSDLSVFYRCEISGYQDSLYAHSNRQFYRESIITGTVDFIFGRAAAVFQNCTILAKRGLPEQTNTITAQGANDSTSPSGFSIQFSNISAHSELLPFLNCTRTYLGRPWKEYSRTVFMQSYMSEMVSPQGWKEWNGTLYLDTLYYGEFMNYGPGSGLSERVKWPGYHVINDYDEASNFTVAQFILGDLWLPSTGVNYASGFTK 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03139 519 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 74 165 IPR035513 -
Arst3g03139 519 FunFam Pectinesterase 200 517 - -
Arst3g03139 519 Pfam Plant invertase/pectin methylesterase inhibitor 38 155 IPR006501 GO:0004857
Arst3g03139 519 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 172 IPR035513 -
Arst3g03139 519 CDD PMEI-like_4 18 175 - -
Arst3g03139 519 Gene3D - 201 517 IPR012334 -
Arst3g03139 519 PANTHER PECTINESTERASE 40 507 - -
Arst3g03139 519 SUPERFAMILY Pectin lyase-like 202 515 IPR011050 -
Arst3g03139 519 Pfam Pectinesterase 205 503 IPR000070 GO:0030599|GO:0042545
Arst3g03139 519 SMART PMEI_2 39 170 IPR006501 GO:0004857
Arst3g03139 519 ProSitePatterns Pectinesterase signature 2. 350 359 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03139 Arst-Chr3 55875608 55879506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03139 33 517 Carbohydrate Esterase AT3G43270 54.781 0.0 560