Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03136 ATGGCTTCCACCTCTCATAAACTCACCTTCCTCTTTTCTCTCACACTCTTTTTATTATTCTCCTCATCACATGCTTATGCTGCTGTTAACTCTTCAAATTCCTCAACACTATTTCACACCAACCTTTCTTCCTTAAGATCTTTCTGCAAAACCACCCCTTACCCAGAAACATGCTTCGAATCACTGAAGCTTTCAATCTCAATAAACATAAGTCCAAACATCATTACCTACCTCCTTCACTCCCTACAAGTCGCAATTTCCGAAGCCACAAAGCTATCAACACTTTTCCAAAGCGTTGGTGCCTCAAACTCAAACATCAGAGAGAAACAAAAGGGTTCAATCCAAGACTGCAAGGAGCTTCACCAATCAACTTTAACATCTCTAAAGAGATCACTCTCCGGGGTTCGTAACTCCCAGAACTCAAGAAAATTGCGTGATGCTAGAACCTTCCTCAGTGCAGCACTCACAAACAAGAACACTTGTCTAGAAGGCCTAGACTCTGCTTCCGGAACCATGAAACAAAAACTGGTAAACTCCGTTATTAACACTTACAAGCACGTGAGTAATTCCCTCTCAATGCTTTCTAATCCAGGAAGTGACGACAACGATGGTGGATTCATGAAGAAAAGCTTGGAAGATGGGGAGCAGTATGATCCAAACGAGGTGATTGTTGTGGCGAAAGATGGAACAGGGAACTTCAGCACTGTCTCTGATGCAATAAACTTTGCTCCCAATAACAGCTATGTGAGGACGGTAATCTATGTGAAAGAAGGGGTTTATGAGGAAAATGTTGAGATCCCAAGTTGTAAGCCTAACATTGTTCTTGTTGGAGATGGAAGTGACGTCACTGTCATTACTGGTAGCAGAAGTGCTGGTGATGGATGGACCACTTTCAGATCTGCAACTCTAGCTGTATCTGGTGATGGCTTTCTAGCACGTGACATAGCTTTTGAGAACAGTGCAGGTCCTGAGAAGCGTCAAGCAGTTGCATTAAGAGTAAACGCAGATTTAACCGCTTTCTACCGGTGTTCCATTTATGGTTACCAAGACACGCTCTATGTTCACTCCTTCAGACAATTCTACAGAGAATGCGACATTTACGGAACCATAGATTTCATATTCGGTAACGCCGCCGTAGTCCTACAAGAATGTAACATTGTTTCAAGAAAGCCATTGCCTGGCCAATTCACTGTGATAACGGCACAATCGAGAGATACGCCGGACGAGGACACCGGAATCTCGATCCAAAACTGCTCAATTATAGCCACAACTGATTTGTATGCAGCTTCAAACTCTAGCACTACCATTAAGAGCTACCTTGGTAGGCCATGGAGGGTTTATTCAAGAGTTGTTTATCTTGAGTCATACATTGATGACTTCATTGACCCAAAGGGTTGGTCAAAATGGTCTAATAGTGATGATGATCAAGGCTTGGATACTTTGTATTATGGAGAGTTTGAGAATTATGGACCTGGTTCAAGAACAAATGGACGTGTAAATTGGGTTGGCTACCATGTGATGAATTACAATGATGCCTATAACTTCACGGTTTCAGAGTTCATCACTGGTGATGCTTGGCTTGGGTCTACTTCTTTTCCTTATGATGATGGTATTTAA 1617 0.4242 MASTSHKLTFLFSLTLFLLFSSSHAYAAVNSSNSSTLFHTNLSSLRSFCKTTPYPETCFESLKLSISINISPNIITYLLHSLQVAISEATKLSTLFQSVGASNSNIREKQKGSIQDCKELHQSTLTSLKRSLSGVRNSQNSRKLRDARTFLSAALTNKNTCLEGLDSASGTMKQKLVNSVINTYKHVSNSLSMLSNPGSDDNDGGFMKKSLEDGEQYDPNEVIVVAKDGTGNFSTVSDAINFAPNNSYVRTVIYVKEGVYEENVEIPSCKPNIVLVGDGSDVTVITGSRSAGDGWTTFRSATLAVSGDGFLARDIAFENSAGPEKRQAVALRVNADLTAFYRCSIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVLQECNIVSRKPLPGQFTVITAQSRDTPDEDTGISIQNCSIIATTDLYAASNSSTTIKSYLGRPWRVYSRVVYLESYIDDFIDPKGWSKWSNSDDDQGLDTLYYGEFENYGPGSRTNGRVNWVGYHVMNYNDAYNFTVSEFITGDAWLGSTSFPYDDGI 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03136 538 Gene3D - 218 538 IPR012334 -
Arst3g03136 538 CDD PMEI-like_3 47 199 - -
Arst3g03136 538 Pfam Pectinesterase 223 524 IPR000070 GO:0030599|GO:0042545
Arst3g03136 538 NCBIfam pectinesterase inhibitor domain 10 194 IPR006501 GO:0004857
Arst3g03136 538 SMART PMEI_2 40 193 IPR006501 GO:0004857
Arst3g03136 538 Pfam Plant invertase/pectin methylesterase inhibitor 44 193 IPR006501 GO:0004857
Arst3g03136 538 SUPERFAMILY Pectin lyase-like 220 535 IPR011050 -
Arst3g03136 538 FunFam Pectinesterase 216 538 - -
Arst3g03136 538 FunFam Pectinesterase 41 196 - -
Arst3g03136 538 PANTHER PECTINESTERASE 23 528 - -
Arst3g03136 538 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 196 IPR035513 -
Arst3g03136 538 ProSitePatterns Pectinesterase signature 2. 366 375 IPR033131 -
Arst3g03136 538 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 196 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03136 Arst-Chr3 55739511 55743300 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03136 43 538 Carbohydrate Esterase AT2G26440 65.385 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03136 - - aip:107630581 1040.02