Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03135 ATGGCATTCCAAGATTTCGATATCATAAACGAACGGAGACGACAGGAGAGGAGAAAAAAGATCCAGAAGAGAATCCTCATCGGTCTAGTATCTACCATTCTTCTTGTATGCATCATAGGCGCTGCGGCCTACGTTGGACTCAATTCCAAGTCCTCCGGTGGAGGTGGGAGTGACCACGGCAAGTCACCGTCCAAGCCGAGTCACCAGCCTACCACCACCTCTGCTTCCGCCTCGGCCTCCACCAATACCAAAGCATTGGAAGCTTCATCGAAGATTGTGAAAGTAATATGCGAAGCTGCAGAATATAAGGACAAATGCGAAAGCTCCCTTGGCGATGCTGTTAAGAATGACCCCAACGCACAACCAAAAGATCTGCTTAAATACTCCATCAAACTAGCTCAGGACGAGGTTGGAAAGGCCTTCAACAAAACCACCTCCATGAAATTTGAATCCGAAATGGACAAAGGAGCGTATGAAGATTGCAAGCAGCTTTTTGACGACGCCAAGGAAGAACTCGGCTTCTCCATCTCCGAAATCACCGCTGATGATCTGAAGAAGCTTTCTACAAAAGCCCCTGATCTCAACAACTGGCTGAGTGCAGCTATCTCTTACCACCAAACCTGCATTGATGGCTTCCCCGAAGGGGAATTGAAGACACAACTTAAGGATGTCTTTAAGGATTCTCAAGAATTTGTTAGCAATTCGCTTTCTATTGTAACTGCAGTGTCGACAGTTCTTTCTGCCGTGCAATCAGTTTTGACTCGCCACTTGCTTTCGGAGAAAAACGTCAGCGCTACTCCTTCTTGGGTCAACAGCGAGGATCGGAGGATTCTGAAGGCGGCGGATGACAAACCCACGCCGAACGTAACTGTGGCAAAAGATGGCAGCGGCAACTTCAAAACTGTCTCCGAAGCCTTGGCAGCCATTCCAGAAAAATATGATGGACGCTACGTAGTTTATGTTAAAGAAGGAATATACGAGGAGACAGTGACTGTTACAAAGAAAATGGAAAACATGACCATGTATGGTGATGGATCACAAAAGAGTATCATCACTGGCAGCAAAAATTTTGTAGATGGAGTTAGGACTTTCCAAACTGCAACCTTTGTGGTGCTTGGAAATGGGTTCTTGGGCAAAGCAATGGGATTTAGAAACACTGCTGGGCCGGAGAAGCATCAAGCGGTGGCAGCCAGAGTTCAAGCAGACCGTGCAATGTTCGTTAACTGTCGCTTCGAGGGCTACCAAGACACGCTATACGCCCAAACCCACCGCCAATTCTACCGGAGCTGTGTCATTTCCGGCACCGTCGATTTCATCTTTGGCGACGCAGCCGCCATCTTCCAGAACTGCATCATGACACTTAGAAAACCAATGGACAATCAACAAAACATCGTAACTGCTCAAGGCAGGTACGACCAAAAGGAGACAACTGGCTTCGTTCTGCAAAAGTGTGAGATCAAAGCGGACGACAAGCTAGCTCCGGATAAGGACAAGATCAGGAGCTATCTTGGGAGGCCATGGAAGGAATACTCGAGAACCATTGTAATGGAATCCGATATTGGCGATGTAATTCACCCTGATGGGTGGCTACCTTGGGAAGGCGACTTTGCACTCAAGACACTATTCTATGGTGAGTTCAACAACACAGGACCTGGTGCCAGCACCAATGCCAGGGTCAACTGGGTTGGCCGCAAAGTCCTTAGCAGGGATGAGGCTAGCAAGTTCACTGTAGGAACTTTCTTGGATGGAGCATGGTTTAGTGGTAGAGGCGTACCAACTCAATATGGCTTGTACAATTGA 1800 0.4778 MAFQDFDIINERRRQERRKKIQKRILIGLVSTILLVCIIGAAAYVGLNSKSSGGGGSDHGKSPSKPSHQPTTTSASASASTNTKALEASSKIVKVICEAAEYKDKCESSLGDAVKNDPNAQPKDLLKYSIKLAQDEVGKAFNKTTSMKFESEMDKGAYEDCKQLFDDAKEELGFSISEITADDLKKLSTKAPDLNNWLSAAISYHQTCIDGFPEGELKTQLKDVFKDSQEFVSNSLSIVTAVSTVLSAVQSVLTRHLLSEKNVSATPSWVNSEDRRILKAADDKPTPNVTVAKDGSGNFKTVSEALAAIPEKYDGRYVVYVKEGIYEETVTVTKKMENMTMYGDGSQKSIITGSKNFVDGVRTFQTATFVVLGNGFLGKAMGFRNTAGPEKHQAVAARVQADRAMFVNCRFEGYQDTLYAQTHRQFYRSCVISGTVDFIFGDAAAIFQNCIMTLRKPMDNQQNIVTAQGRYDQKETTGFVLQKCEIKADDKLAPDKDKIRSYLGRPWKEYSRTIVMESDIGDVIHPDGWLPWEGDFALKTLFYGEFNNTGPGASTNARVNWVGRKVLSRDEASKFTVGTFLDGAWFSGRGVPTQYGLYN 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03135 599 SUPERFAMILY Pectin lyase-like 286 587 IPR011050 -
Arst3g03135 599 ProSitePatterns Pectinesterase signature 2. 432 441 IPR033131 -
Arst3g03135 599 Gene3D - 282 597 IPR012334 -
Arst3g03135 599 FunFam Pectinesterase 282 597 - -
Arst3g03135 599 Gene3D Invertase/pectin methylesterase inhibitor family protein 89 243 IPR035513 -
Arst3g03135 599 CDD PMEI-like_3 96 244 - -
Arst3g03135 599 MobiDBLite consensus disorder prediction 52 80 - -
Arst3g03135 599 Pfam Plant invertase/pectin methylesterase inhibitor 92 238 IPR006501 GO:0004857
Arst3g03135 599 FunFam Pectinesterase 89 243 - -
Arst3g03135 599 PANTHER PECTINESTERASE 35 587 - -
Arst3g03135 599 Pfam Pectinesterase 288 583 IPR000070 GO:0030599|GO:0042545
Arst3g03135 599 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 91 241 IPR035513 -
Arst3g03135 599 NCBIfam pectinesterase inhibitor domain 74 240 IPR006501 GO:0004857
Arst3g03135 599 SMART PMEI_2 88 238 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03135 Arst-Chr3 55736127 55738806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03135 1 599 Carbohydrate Esterase AT2G26450 49.679 0.0 608