Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03125 ATGACGAGAACACAAGAATTAGTGATGATGATAACCTTTTTAGTGTTGGGATGTGCACTAACCATGGCAGAAACAGCAGCTCTAGAGCATGCTCATCACTATGAATGCACTCATACCAGATACCCTAGTCTATGTGATGAAACCTTGAAGGAGTTGATGAGTTCAGGGAATGATAAAAATGTTGATATCATTCTGGCTCTTGTAAACAAAACCATATCTGAAACCAACTTGCCAAGATCATATTTTGCTTCATTTGAGACTCAGGATAATGCTCAACAAGACAAATCATCTTCATCAGTCGGAGGTTATTGTCAAGAGCTAATGGACATGTCAATGAAGAGGTTGGACCAATCCATGGAAGCACTGAGCAAGCCAACAAGAAACAAGGAGGACATCCAAACGTGGCTAAGCGCTTCCCTAACTTTCCAACAAACTTGCAACGACTTCGCACGATCACAAACCTCCACCGGCGTCGCCACTGCCGTGGTAGACACCATTTCCAAGAAGATGGACTATCTTTCCGCATTAGCCAGTAACTCACTTGCCCTGGTTAACCAAATCACCGCCACCACAACCACAACCACTACCACGAAGCGAAAAGAAAAGGAAAGCAAAGAGGAATTTCCCGAATGGATTTCTTCGAAAGCAAGAAAACTCCTTCAGGGAGCAGCGCCCATAGAAGCGAACGCGGTGGTTGCGCAAGACGGTTCAGGGAACTACAAGACGATTTCTGAGGCCATTGCAGCGGCCACAGGTGGAAGATTTGTGATTTACGTGAAAGCAGGGACTTACAAGGAGAAGATTCGGACAAGTAAGAATGGCATAACGTTGATTGGAGCGGGTAAATATTCGACCGTTATTGTTGGAAGTGAGAGCGTTAAGGGTGGAGCTTCCTTGCCTGACACCGCCACATTCACAATCATGGGGGATGGATTCATAGCAAAAGACATAGGTTTCCACAACAACGCAGGCCCACAAGGCGAACAAGCCGTGGCTCTCTACATAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAAGACACCATCTACGCCCACTCCCTCCGACAATTCTACAGAGAATGCGACATCTACGGCACCATCGACTTCATCTTCGGAAACGCCGCTGCCGTCTTCCAAACCTGCAACATCATGCTCCGCCGCCCTCTCCACGGCGGCTCCAACGCCGTTCTCGCCAACGGAAGAACTGATCCTGGACAGAACACAGGCTTCTCGCTTCACAAGTGTGCCATAACACCAAGCTCGGATTTGTCTCCTGTGAAGCACTCTGTTAAGTCTTATCTTGGGAGGCCCTGGAAGGAGTATTCTAGGGCCGTCGTGATAGGATGTACCATAGACGACGCCATTGCGCAGCAGGGTTGGGTTGAGTGGCCTGGTTATGGAAGCTCGGTCTTGAGGACACTGTATTTTGGTGAGTATGGTAATTCAGGACCTGGTGCTGGAACTGCAAGAAGGGTTCAGTGGCCTGGTTTTCATGTCATGGGTAATGTTGAGGCTTCTAAGTTCACTGTTGGTAACTTTATTGCTGGAAGTTCATGGATTCCTTCCTCCGTCGGTTTCATCTCGGGTCTCTAA 1608 0.4683 MTRTQELVMMITFLVLGCALTMAETAALEHAHHYECTHTRYPSLCDETLKELMSSGNDKNVDIILALVNKTISETNLPRSYFASFETQDNAQQDKSSSSVGGYCQELMDMSMKRLDQSMEALSKPTRNKEDIQTWLSASLTFQQTCNDFARSQTSTGVATAVVDTISKKMDYLSALASNSLALVNQITATTTTTTTTKRKEKESKEEFPEWISSKARKLLQGAAPIEANAVVAQDGSGNYKTISEAIAAATGGRFVIYVKAGTYKEKIRTSKNGITLIGAGKYSTVIVGSESVKGGASLPDTATFTIMGDGFIAKDIGFHNNAGPQGEQAVALYIAXXXXXXXXXXXXXXQDTIYAHSLRQFYRECDIYGTIDFIFGNAAAVFQTCNIMLRRPLHGGSNAVLANGRTDPGQNTGFSLHKCAITPSSDLSPVKHSVKSYLGRPWKEYSRAVVIGCTIDDAIAQQGWVEWPGYGSSVLRTLYFGEYGNSGPGAGTARRVQWPGFHVMGNVEASKFTVGNFIAGSSWIPSSVGFISGL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03125 535 Coils Coil 535 535 - -
Arst3g03125 535 SMART PMEI_2 27 183 IPR006501 GO:0004857
Arst3g03125 535 Pfam Plant invertase/pectin methylesterase inhibitor 36 183 IPR006501 GO:0004857
Arst3g03125 535 NCBIfam pectinesterase inhibitor domain 14 187 IPR006501 GO:0004857
Arst3g03125 535 FunFam Pectinesterase 29 188 - -
Arst3g03125 535 SUPERFAMILY Pectin lyase-like 226 527 IPR011050 -
Arst3g03125 535 CDD PMEI-like_3 36 187 - -
Arst3g03125 535 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 189 IPR035513 -
Arst3g03125 535 PANTHER PECTINESTERASE 18 526 - -
Arst3g03125 535 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Arst3g03125 535 Pfam Pectinesterase 229 521 IPR000070 GO:0030599|GO:0042545
Arst3g03125 535 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 187 IPR035513 -
Arst3g03125 535 FunFam Pectinesterase 4 226 534 - -
Arst3g03125 535 Gene3D - 223 535 IPR012334 -
Arst3g03125 535 ProSitePatterns Pectinesterase signature 2. 368 377 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03125 Arst-Chr3 55322758 55327794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03125 10 535 Carbohydrate Esterase AT2G45220 42.373 1.43e-127 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03125 K01051 - gmx:100795439 642.884