Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03109 ATGGCGTCGTCGGAGAATGAGGCTTCGTATCACTCAACTTCTCCTGCCTCTGACGAACTGCGTTCTCTTCCTCCTGAACATACTTGTATCCAGAAGTTTAGGCTCTATGAGACTCTTTCGAACTTTTACATGATAGGAACGGATAAAAGCAATACTTATTGGAGAGTGCTAAAGATTGGCCGTTTAGATCCTTCTGAGCTAAATGTGCGTGAAGATTCTACCACATATACGGAAAGTGAAATATCTGATCTGCTGAGGCGTATTCATGAGGGGAATAAGTCCACGGGTGGACTGAAATTTGTGACAACTTGTTATGGAATTGTTGGCTTCATAAAATTTTTGGGGCCTTACTACATGCTTCTTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGCCATACAGTATATGCTGTTTCGAAGAGTGAGATGATTCCACTGAGAAGTTCTTCAGTTCAGTCTAACATGACTAATACTAAAAGTGAAAACAGATACAAGAAGCTCCTAAGCATGGTCGACCTTACAAAGGATTTCTATTTCAGCTACTCATACCACATAATGCGCAGTCTTCAAAGGAATTTGTGCGAAAATGAGACAGGCCATGTCCTTTATGAGACAATGTTTGTCTGGAATGAATTTTTGACTCAAGGAATTAGGAATAGCCTTCAGAATACTCTTTGGACAGTTGCGCTTGTGTATGGATTTTTTAAACAGGACACACTTGCAATATCTGGTCGGCAGTTCATACTTACACTAGTTGCAAGGAGGTCTCGTCATTACGCTGGCACTAGGTATCTGAGACGGGGTGTAAATGAGAAGGGCAGAGTAGCTAATGATGTTGAGACAGAACAAATTGTGTTTGAAGCTGTTCCTGAAGGTCTCCCTGTCCAAATAAGCTCCGTTGTCCAGAACAGGGGTTCAATCCCTCTTTTCTGGTCACAGGAGACTTCGCGTCTGAATCTTAAACCAGATATTATATTGTCAAAGAAGGATGAAAATTACCAAGCAACTAAACTTCACTTTGAGAATCTTGTCAAAAGATATGGGAACCCCATAATTATTTTGAATTTAATAAAGTCACGTGAGAGGAAGCCTCGCGAGTCAATACTCCGTTCAGAGTTTGCTAATGCAATTAATTTCATAAACAAAGATTTATCTGAGGAGAACAAGCTTAGGTTCCTTCATTGGGATCTGCACAGACATTTTCAGAGAAAATCTACAAATGTCTTGCGGCTTCTGGGAAAAGTGGCAGCACATGCCTTGTCACTAACAGGAATTTTCCATTGCCAAGCAACCCCTAACTTTAGACCAGAAGACAGTGTGAAATGGCTATCTACTGATTTTGCATATTGCAATGTTGATAAAGGAAGCTTTCAACCTGCAAGGCATGTGAATGTTGACATTGAGGATGTTCTTAATCTTGAGAGGAAACCTGGTGGTGAGAACAATATTACTAATGGAAAGCAGTCTATCAAGCTTCCCATGTTCCAAAGAGGGGTGCTCAGGACCAATTGCATAGACTGCTTAGATCGCACGAATGTGGCGCAATATGCATATGGGTTAACTGCTCTTAGTCACCAGCTTCATGTTCTGGGAGTTATTGATGACCCAAAAATTGATCCTGATGATCCTCTAGGCGATGGTTTGATGGGATTTTATGAGCAGATGGGTGACACACTTGCACGTCAATATGGTGGTTCTGCTGCACACAACAAGATATTTTCTGAGAGGAGGGGTCAGTGGAGAGCTGCAACACAGTCACAGGAGTTTTTTAGGACTCTTCAACGGTATTACAGCAATGCCTACATGGATGCTGAGAAACAAAATGCAATTAACATATTTCTGGGGCATTTTCAGCCACAACAGGGTAGGCCTGCTTTGTGGGAGTTGGATTCAGATCAACATTATGATGTAGGGAGACATGGAGATGATGATGCAAGGTCAATTGTCAAACGATGTTTCTCAGATGGAAACATTCTTCGTGATAGTTCTACACCTATATCGACCCTGGATCTCAAGCATGGAAGGTTAACTAAGCTAGATTTTCTAGACCAATCAGAAGATGGAAGCAGGGGTTTTTGTGATTCATCACCTGAAATATCAACTTGTGAGAGTGACATGTCTTTTTCAAGGTACACTCCTCCAGTGTCTCGGAGACACCTTTTTGGAGAGATGCAAAGAGACTGTTGCTTTGAAAGTGATCAAATTTTCTATTCTGAGCATCCAGAATCATTCAGCAGCTCCAACTTTGTTGACTTGAATTGGCTATCTTCAATAAATTCATGTGAAGAGGAGCATAAGAGGTCGTCAATTCCCAGGCTGTCTTCAAAAAGTGTTGGTAATGGAATTACTGGTGGAGATGCAACTGCTTCCACTAGTGAGTCAGGCTACAGGAACAAGGGTAGGAAGCAAAGTGGATCTGATGCATCCTGCGACGATACCAGGTCCAAAATTCTAGAGGAATTTCCCAATACTTTTGTACAATGGGTGACTCATGGACAGACACTTTCTCATTGA 2517 0.416 MASSENEASYHSTSPASDELRSLPPEHTCIQKFRLYETLSNFYMIGTDKSNTYWRVLKIGRLDPSELNVREDSTTYTESEISDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHTVYAVSKSEMIPLRSSSVQSNMTNTKSENRYKKLLSMVDLTKDFYFSYSYHIMRSLQRNLCENETGHVLYETMFVWNEFLTQGIRNSLQNTLWTVALVYGFFKQDTLAISGRQFILTLVARRSRHYAGTRYLRRGVNEKGRVANDVETEQIVFEAVPEGLPVQISSVVQNRGSIPLFWSQETSRLNLKPDIILSKKDENYQATKLHFENLVKRYGNPIIILNLIKSRERKPRESILRSEFANAINFINKDLSEENKLRFLHWDLHRHFQRKSTNVLRLLGKVAAHALSLTGIFHCQATPNFRPEDSVKWLSTDFAYCNVDKGSFQPARHVNVDIEDVLNLERKPGGENNITNGKQSIKLPMFQRGVLRTNCIDCLDRTNVAQYAYGLTALSHQLHVLGVIDDPKIDPDDPLGDGLMGFYEQMGDTLARQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAEKQNAINIFLGHFQPQQGRPALWELDSDQHYDVGRHGDDDARSIVKRCFSDGNILRDSSTPISTLDLKHGRLTKLDFLDQSEDGSRGFCDSSPEISTCESDMSFSRYTPPVSRRHLFGEMQRDCCFESDQIFYSEHPESFSSSNFVDLNWLSSINSCEEEHKRSSIPRLSSKSVGNGITGGDATASTSESGYRNKGRKQSGSDASCDDTRSKILEEFPNTFVQWVTHGQTLSH 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03109 838 MobiDBLite consensus disorder prediction 773 804 - -
Arst3g03109 838 Pfam SacI homology domain 105 402 IPR002013 GO:0016791
Arst3g03109 838 MobiDBLite consensus disorder prediction 1 22 - -
Arst3g03109 838 MobiDBLite consensus disorder prediction 770 812 - -
Arst3g03109 838 ProSiteProfiles Sac phosphatase domain profile. 169 566 IPR002013 GO:0016791
Arst3g03109 838 MobiDBLite consensus disorder prediction 1 19 - -
Arst3g03109 838 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 21 826 IPR043573 GO:0043813|GO:0046856
Arst3g03109 838 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 21 826 IPR043573 GO:0043813|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03109 Arst-Chr3 54273315 54286267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03109 30 838 Acyl Lipid Metabolism Gene Families AT3G43220 59.828 0.0 953
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03109 K22913 - gmx:100786438 1272.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03109 3 54273315 54286267 Arst10g02462 10 86311714 86322980 ECH
Arst3g03109 3 54273315 54286267 Arst3g03109 3 54273315 54286267 ECH
Arst1g02604 1 87813399 87822096 Arst3g03109 3 54273315 54286267 PCT