Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03079 ATGGAAGTGAAACCCATAGCTCTGAAATTGCTAGTCCTTACTGTAGCTTTTCTGGCTCTTCTTCTTGGACTTTCCTCTAGTGCAGCACTTAATGAGACTTGCGGTTCGCTCAATCGAGATACTGAAGCACCATGCCCAACTGGTTGGGTTATAGATCCTAATAAGACCAAGTGTTTTCTCCATGTTGGGAGGCCTCAATCTTGGAATGATTCAGAGACCTGTTGCAATAAGTATGGTGGCCATTTAGCATCACTGGTATCGGTTCAGGAGCTACAATTTGCTCAGAGTCTATGCGGTGAATTTATAAATAGTTGCTGGATTGGTGGAAGAAATCTCAATTCTACATCTGGTTACCAATGGATGTGGTCTGACAATTCTCAATGGAATCAGTCCCTTTTTCCCTTGACTGATGTTCCAACCAACTGTAAACCATCTTGTCGTGTGAATAGAACTATCGATTTGTGTGCATTAATGACTAACAACTCAAAATCTCTCTTGAGTGAGAGATGCGAGAATCCTTATTCTTTTGTATGTGTACTTGATATAGGTAGGAAATGTAACCATACGCATTGCCACAGGGAATACCTTATCATCCTTTCAGTTGTGAGTGCATTGATACTCTCGATAACATTAGCCGTGGTGGTTTGGCTCCTTGTATATAAACAGGGCAAGAAAAGAAGGCGGTCTAGAAAGCTATCTGACCCAGCAGCTTCTCTTCCATCATGGAAAGTTTTTACTAAAGATGAATTAAGGTCTATTACAAAGAATTTCAGTGAAGGTAACCGTCTTGTTGGGGATGCCAAGACAGGTGGTACATACAGTGGGGTCCTACCAGATGGCTCAAAGGTTGCAGTTAAGAGATTAAAGAGGTCAAGCTTCCAACGTAAAAAGGAATTCTATTCAGAGATTGGCAGAGTTGCAAGGCTCCACCATTCAAATCTAGTAGCTGTGATGGGGTGCTGCTATGATCATGGTGATCGATATATTGTTTATGAGTTTGTAGCAAATGGGCCCTTAGATAAATGGCTACATCACATACCAAGAGGTGGCCGTAGCTTAGACTGGGCTATGAGGATGAAAATTGCCACGACGCTTGCTCAAGGGATTGCGTTTTTGCATGACAAGGTTAAGCCACAAGTTGTGCATCGAGATATACGAGCTAGTAATGTACTGCTAGACGAGGAGTTCGGAGCACACCTAATGGGAGTTGGCCTATCAAAGTTTGTACCATATGAAGCAATGCATGAGCGGGAGCGGACCGTGATGGCAGGGGGAACACACGGATATCTTGCTCCAGAGTTTGTGTATCGAAACGAGCTAACAACAAAGAGTGATGTCTATAGTTTTGGTGTCCTACTACTCGAAATAGTCACTGGGCGCCGACCTGCACAACCAGTTGATTCCATGGGTTGGCAGAGTATATTTGAATGGGCGACGCCCCTCGTGCAAGCAAATCGCTACCCTGAACTCTTGGATCCTCATATATCATCATCATCTTCAAGTATCATTCCAGAGGCTAGCACCATTCAGAAGGTGGTGGACCTTGTCTATTCTTGCACACAGCATGTCCCATCTATGCGCCCGAGAATGTCTCACGTTGTTCTTCAGTTACAACAGTTCTCCCAACCACCTGCAAAGTAA 1641 0.4394 MEVKPIALKLLVLTVAFLALLLGLSSSAALNETCGSLNRDTEAPCPTGWVIDPNKTKCFLHVGRPQSWNDSETCCNKYGGHLASLVSVQELQFAQSLCGEFINSCWIGGRNLNSTSGYQWMWSDNSQWNQSLFPLTDVPTNCKPSCRVNRTIDLCALMTNNSKSLLSERCENPYSFVCVLDIGRKCNHTHCHREYLIILSVVSALILSITLAVVVWLLVYKQGKKRRRSRKLSDPAASLPSWKVFTKDELRSITKNFSEGNRLVGDAKTGGTYSGVLPDGSKVAVKRLKRSSFQRKKEFYSEIGRVARLHHSNLVAVMGCCYDHGDRYIVYEFVANGPLDKWLHHIPRGGRSLDWAMRMKIATTLAQGIAFLHDKVKPQVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPYEAMHERERTVMAGGTHGYLAPEFVYRNELTTKSDVYSFGVLLLEIVTGRRPAQPVDSMGWQSIFEWATPLVQANRYPELLDPHISSSSSSIIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVLQLQQFSQPPAK 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03079 546 SMART tyrkin_6 270 537 IPR020635 GO:0004713|GO:0006468
Arst3g03079 546 Pfam Lectin C-type domain 65 179 IPR001304 -
Arst3g03079 546 Pfam Protein tyrosine and serine/threonine kinase 273 537 IPR001245 GO:0004672|GO:0006468
Arst3g03079 546 FunFam C-type lectin receptor-like tyrosine-protein kinase 235 333 - -
Arst3g03079 546 SUPERFAMILY Protein kinase-like (PK-like) 231 537 IPR011009 -
Arst3g03079 546 Gene3D Phosphorylase Kinase; domain 1 233 333 - -
Arst3g03079 546 Gene3D - 24 181 IPR016186 -
Arst3g03079 546 SMART CLECT_2 45 179 IPR001304 -
Arst3g03079 546 CDD CLECT 57 178 - -
Arst3g03079 546 ProSitePatterns Tyrosine protein kinases specific active-site signature. 380 392 IPR008266 GO:0004672|GO:0006468
Arst3g03079 546 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 334 546 - -
Arst3g03079 546 ProSiteProfiles Protein kinase domain profile. 258 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g03079 546 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 111 539 - -
Arst3g03079 546 Gene3D Transferase(Phosphotransferase) domain 1 334 545 - -
Arst3g03079 546 SUPERFAMILY C-type lectin-like 30 181 IPR016187 -
Arst3g03079 546 ProSiteProfiles C-type lectin domain profile. 54 179 IPR001304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03079 Arst-Chr3 51714387 51718187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03079 75 543 Receptor kinase-like Gene Family AT1G52310 69.295 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Arst3g03079 PK_Tyr_Ser-Thr 9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03079 - - gmx:100779497 891.338