Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03074 ATGAAGGCTCCTTCCAATGGTTTCTTGCCTAATTCTGGCGAAGGAGAAAAGAAAACAATCAATTCAGAGTTATGGCATGCTTGTGCTGGACCATTGGTTTCTTTACCTCCTATTGGAAGTCTTGTGGTTTATTTCCCTCAAGGACACAGCGAACAAGTTGCAGCATCCATGCAAAAGGAGGCCGACTTCGTACCAAGTTACCCGAACCTTCCATCCAAGTTGATTTGCATGCTTCACAATGTTGTCCTTCATGCTGATCCTGAAACTGACGAGGTTTATGCTCAAATGACCCTTCAACCTGTAAATAAATATGATAAGGAAGCAATACTGGCATCCGACATGGGTCTCAAGCAAAACCAGCAGCCTACTGAATTCTTTTGCAAAACTCTCACAGCTAGTGACACAAGCACTCATGGTGGATTTTCTGTGCCTCGTCGAGCAGCGGAAAAAATATTCCCACCTCTGGACTTTTCGATGCAACCTCCGGCTCAGGAGATTGTTGCGAAGGATTTGCACGATAGTACATGGACATTTAGGCATATTTATCGCGGACAACCAAAGAGGCACTTGTTGACTACCGGATGGAGTGTCTTTGTTAGCACGAAAAGGCTATTTGCTGGAGATTCTGTTCTTTTCATTAGAGATGAAAAACAGCAACTTCTTTTAGGTATAAAGCGCGCTAATAGGCAGCAGCCGGCACTCTCTTCATCGGTAATATCCAGTGACAGCATGCACATTGGCATTCTTGCTGCTGCAGCCCATGCTGCTTCAAATAACAGCCCTTTTACCATATTTTATAACCCAAGGGCAAGCCCCTCGGAATTTGTGATTCCGTTGGCCAAGTACAACAAGGCCATGTACACTCAAGTTTCTCTTGGTATGAGATTTAGAATGATGTTTGAGACTGAGGAGTCTGGAGTACGCAGATATATGGGTACAATCACCGGCGTTAGTGACTTGGATCCGGTCCGATGGAAAAACTCACAGTGGCGCAATCTTCAGGTTGGTTGGGATGAATCAACAGCTGGGGAGCGCCCAAGCAGAGTTTCGATCTGGGATGTTGAACCAGTAGTTACTCCTTTCTACTTTACGATTTTGCAAGACGAGTCTGACATAGAAAATGCTTTTAAGAGAGCTATGCCCTGGCTTGGAGATGAACTTGGCATGAAGGATGCTTCAAGCTCAATCTTTCCTGGTTTGAGTTTAGTGCAATGGATGAGCATGCAGCAGCAGAACAATCAATTTGCCGCCACCCAATCCGGATTTTTCCCGCCATCTATGCTTTCATCCAATACCCTCCATGGCAACCTTAACAGTAATGATCAATCCAAGATATTGAACTTCCAAGCCCCGGTCCTCTCTGCACCAAATCTTCAATTCAACAAATCTAATCTACCCAACCAAGTCAACCAACTGCAGCAATCTATGACATCATGGCCCCAACAGCTGCAGCAGCCACAGCAGCAGCAGCAGCAGCAGAAGCTGCATTCATTGTTGCAATCGCCAGTAAACCAGCTTCAGCCACAACAGCAGCAGCAACAGAGGCAACAGCAGCTGCCAGAGCCACAAAACTTGTCGCAGTCACAGCAACAACAGCCCCAACTGCCTCAACAGAGAACACAGCAGCTGCAACAACCACAGCAGCAGCCGCCTCCACCACAGCAACACCAACCTCAACAGTCATGTCAACAGCCAATTATGAATAATCGGGTAGTTACTTCTAATCAATGTGTTCAAGTTCAACAACCGGTAGCCTATTCTCAGCTTCAGCAACAGCAGTTAGTCTCCGGAAGCATGCCGACACAACAAAGTATCCAACCTGCCAACAAGAATGCAATGCTAATGACATCCTTGCCATTAGACTCGCAATTTCAGCAATCGATAGATCAGCAAACTAGTCTCTTACAGAGGCAGCAGCAACAACCGACACAGTTGCAACAATCTCCATTGCAGTTTTTGCAACAAAGCACGTCGCAGAGGGCATTGCAGCAACTTCAAGGGACTCAAATGTCACAGCAAAACCCCTCAGAGCAACAGTTACAGTTACAGCTGCTGCAGAAACTGCAACAGCAGCAGCAGCAGCAGCAACAGCAACTTATTTCAACATCTAGTCCACTTTTGCAGTCACAGCTTCTGCAGCAAAAAAATACTCATCTGGCAAACCAGCAACTACCACAGCTGCCTCAATCGCAGCATCAACCTCAACAGCTCGGAAATAATTCATTCCCAATGGAGAAGCTTCTCAACAGCAACAGCTTCTCTTCTTCGTCTCTAATGCAATCGCAACAGCTTTCGGTGAACCAACCAACCCTGAATGCACAGAAATCAGTTATAACTAGTAGAGCTCCTTCTAGTCTTACCGATGTAGACGTGCCATCATGCTCGACTTCACCGTCTACTAATACCTGCCAGATATCTCCACCAAATCTCATGAAAAGAAATCAACAAGCACCAACCACATTCGGGGGGATTTCGGTAGTTGAGCCGACTAATAATTTGGTGCAAGAGCTTCATAATAAGTCTGATATGCCGATAAAACATGAATTATCCGGCATAAAAGGCCCTGACCAGCTTAAGTATAAAGGTACAATCAGTGATCAGCTGGAAGCTTCTTCGTCCGGAACATCTTACTGTATTGATCCGGGTAGCATCCACCAGAACTTCCAACTTCCAAACTTCTGCATGGATGGTGATGTTCAATCGCATCCTAGACAAAATCTACCATTTGCCTCCAATCTTGATGGACTAGCAGCGGATACCATGCTCTCAAGAGGTTATGACTCTCAAAAAGATCTTCAAAACTTGCTGGCTAACTATGGCGGTGCTCCAAGAGACATCGAAACAGAGCTGTCCACTGCCGCCATCAGCTCGCAGTCATTTGGGGTGCCGAACATGCCTTTCAAGCCTGGTTGCTCAAGTGATATTCCCATGAACGATGCTGGGGTTTTGAATAATGGCTTATGGGCTAACCAGACTCAGAGAATGCGAACATATACCAAGGTTCAAAAATGTGGTTCTGTTGGAAGATGTATCGACGTCACGCGATACAAAGGATATGATGAACTCCGCCACGATTTGGCTCGAATGTTCGGGATTGAAGGGCAGCTAGAAGATCCTCAAAGGACCGAGTGGAAACTAGTATATGTGGATCATGAGAATGACATTCTTCTTGTTGGTGATGACCCGTGGGAAGAATTCGTAAGCTGTGTTCAGAGCATAAAGATATTGTCGTCCGCCGAGGTGCAACAAATGAGTTTGGATGGGGATCTAGGCCAAGTTCCAATCCCTAATCAAGCATGTAGTGGCACGGAAGGTGGCAATGCATGGAGGGGACAGTACGACGATAACTCTGCCGCCTCATTTAATCGATAA 3372 0.46 MKAPSNGFLPNSGEGEKKTINSELWHACAGPLVSLPPIGSLVVYFPQGHSEQVAASMQKEADFVPSYPNLPSKLICMLHNVVLHADPETDEVYAQMTLQPVNKYDKEAILASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDSTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGVSDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDVEPVVTPFYFTILQDESDIENAFKRAMPWLGDELGMKDASSSIFPGLSLVQWMSMQQQNNQFAATQSGFFPPSMLSSNTLHGNLNSNDQSKILNFQAPVLSAPNLQFNKSNLPNQVNQLQQSMTSWPQQLQQPQQQQQQQKLHSLLQSPVNQLQPQQQQQQRQQQLPEPQNLSQSQQQQPQLPQQRTQQLQQPQQQPPPPQQHQPQQSCQQPIMNNRVVTSNQCVQVQQPVAYSQLQQQQLVSGSMPTQQSIQPANKNAMLMTSLPLDSQFQQSIDQQTSLLQRQQQQPTQLQQSPLQFLQQSTSQRALQQLQGTQMSQQNPSEQQLQLQLLQKLQQQQQQQQQQLISTSSPLLQSQLLQQKNTHLANQQLPQLPQSQHQPQQLGNNSFPMEKLLNSNSFSSSSLMQSQQLSVNQPTLNAQKSVITSRAPSSLTDVDVPSCSTSPSTNTCQISPPNLMKRNQQAPTTFGGISVVEPTNNLVQELHNKSDMPIKHELSGIKGPDQLKYKGTISDQLEASSSGTSYCIDPGSIHQNFQLPNFCMDGDVQSHPRQNLPFASNLDGLAADTMLSRGYDSQKDLQNLLANYGGAPRDIETELSTAAISSQSFGVPNMPFKPGCSSDIPMNDAGVLNNGLWANQTQRMRTYTKVQKCGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGQVPIPNQACSGTEGGNAWRGQYDDNSAASFNR 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03074 1123 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Arst3g03074 1123 SMART B3_2 126 228 IPR003340 GO:0003677
Arst3g03074 1123 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst3g03074 1123 Pfam AUX/IAA family 993 1082 IPR033389 -
Arst3g03074 1123 FunFam Auxin response factor 124 228 - -
Arst3g03074 1123 SUPERFAMILY CAD & PB1 domains 1010 1074 - -
Arst3g03074 1123 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Arst3g03074 1123 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
Arst3g03074 1123 Gene3D - 123 227 IPR015300 -
Arst3g03074 1123 MobiDBLite consensus disorder prediction 726 745 - -
Arst3g03074 1123 MobiDBLite consensus disorder prediction 1101 1123 - -
Arst3g03074 1123 MobiDBLite consensus disorder prediction 783 810 - -
Arst3g03074 1123 Gene3D - 289 360 - -
Arst3g03074 1123 MobiDBLite consensus disorder prediction 474 562 - -
Arst3g03074 1123 Gene3D - 991 1085 - -
Arst3g03074 1123 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 581 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst3g03074 1123 CDD B3_DNA 125 217 IPR003340 GO:0003677
Arst3g03074 1123 MobiDBLite consensus disorder prediction 629 652 - -
Arst3g03074 1123 MobiDBLite consensus disorder prediction 474 545 - -
Arst3g03074 1123 ProSiteProfiles PB1 domain profile. 996 1089 IPR000270 GO:0005515
Arst3g03074 1123 FunFam Auxin response factor 289 361 - -
Arst3g03074 1123 FunFam Auxin response factor 991 1085 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03074 Arst-Chr3 50825806 50833811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03074 1 484 B3 DNA Binding Superfamily AT1G19220 78.313 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst3g03074 AUX_IAA 2.5e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03074 K14486 - gmx:100804628 892.493