LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g03070	ATGGCTGAGGAAGATGTGAAGCTCTTGGGGGTTGTGGGAAGCCCGTTTGTTTGCAGGGTTCAGATTGCTCTAAAATTGAAGGGAGTTGAATACAAATTTGTAACACAAGATTTGCAGAACAAGAGTGAAGAACTCCTCAAATACAACCCAATTCACAAGAAGGTGCCAGTGCTTGTTCACAATGAGAGGCCCATAAATGAGTCCCTTGTGATTGTTGAATACATCGATGAAGCTTGGAAGGGCAAATCCATTTTGCCCGCCGATCCTTACCAGAGAGCCTTGGCACGTTTCTGGGCCAAGTTCATAGATGACAAGGTGTTCGGTGCTGCATGGAAATCTGTTTTCACCGTNNNNNNNNNNNNNNNTGAGAAGAACGTTAAAGAAACACACGAGGGTCTTCAGTTTCTTGAAGATGAGCTTAAAGACAAGTTTTTTGGAGGAGAGGAATATGGCCTTGTGGACATTGCCGCTGTAAACATTGCGTTTTGGGTGCCTCTGGTTCAAGAAGTTGCAGGTCTTCAACTGTTCACTAATGAGAAGTTTCCCAAACTCTACAAATGGAGTCAAGAATTTCTGAGTCAACCAACTATCGAAGAGTGTTTGCCTCCTAGAGACCCAATTTTTGCCTTCTTCAAAGGTCGCTACGAAAGCCTTCTTGCTTCAGCAAAATAG	672	0.4301	MAEEDVKLLGVVGSPFVCRVQIALKLKGVEYKFVTQDLQNKSEELLKYNPIHKKVPVLVHNERPINESLVIVEYIDEAWKGKSILPADPYQRALARFWAKFIDDKVFGAAWKSVFTVXXXXXEKNVKETHEGLQFLEDELKDKFFGGEEYGLVDIAAVNIAFWVPLVQEVAGLQLFTNEKFPKLYKWSQEFLSQPTIEECLPPRDPIFAFFKGRYESLLASAK	223

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g03070	223	FunFam	Tau class glutathione S-transferase	85	221	-	-
	Arst3g03070	223	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	4	83	IPR004045	-
	Arst3g03070	223	SFLD	Glutathione Transferase (cytosolic)	1	221	IPR040079	-
	Arst3g03070	223	SFLD	Glutathione Transferase (cytosolic)	1	221	IPR040079	-
	Arst3g03070	223	CDD	GST_C_Tau	89	214	IPR045074	GO:0004364\|GO:0006749
	Arst3g03070	223	SFLD	Main.3: Omega- and Tau-like	1	221	IPR045073	-
	Arst3g03070	223	SFLD	Main.3: Omega- and Tau-like	1	221	IPR045073	-
	Arst3g03070	223	Gene3D	-	88	222	-	-
	Arst3g03070	223	SUPERFAMILY	Thioredoxin-like	5	106	IPR036249	-
	Arst3g03070	223	SUPERFAMILY	GST C-terminal domain-like	77	216	IPR036282	-
	Arst3g03070	223	CDD	GST_N_Tau	6	79	-	-
	Arst3g03070	223	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	88	210	IPR010987	-
	Arst3g03070	223	FunFam	Tau class glutathione S-transferase	1	87	-	-
	Arst3g03070	223	Pfam	Glutathione S-transferase, C-terminal domain	121	195	IPR004046	-
	Arst3g03070	223	Pfam	Glutathione S-transferase, N-terminal domain	5	77	IPR004045	-
	Arst3g03070	223	PANTHER	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	8	206	IPR045073	-
	Arst3g03070	223	Coils	Coil	123	139	-	-
	Arst3g03070	223	Gene3D	Glutaredoxin	1	87	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g03070	Arst-Chr3	50666349	50667535	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst3g03070	3	221	Glutathione S-transferase Gene Family	AT3G09270	52.703	6.05e-75	224

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g03070	K00799		-	gmx:100500680	353.599