Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03069 ATGGTGAAGCAGAACAATAACGTGGAGAAGCTTGCGTCAATGGAGCGGAGTGATCTGAAGTATAAAGGTGTAAGGAAGCGAAAGTGGGGGAAGTATGTTTCAGAAATAAGGCTACCAAATAGCCGCCAGAGGATTTGGTTGGGATCCTACGATACCGCCGAGAAGGCGGCGCGTGCATTTGACGCGGCCATGTTTTGCTTACGTGGCGCCGCCGCCAAGTTCAATTTCCCCGGTGCTCCGCCGGAGATCGCCGGCGGAAGGTACATGACCCCTCCCCAAATTCAGGCCGCTGCCGCCCGGTATGCCAATTCGGACCCGGTTCGACCCTGTTCCACCTCGACTGAAACTTCCACGATGTTGTCGGAGGAGACTAAAACGGTGATGCCGACATCGGCATCACCATCACCGTCACCGTCCGATGTGACTCTTCAAACGGAATGTGACGTCACAGCCATGAACGGGTCGGGCTCGGATCTTTTTACAACAATAGGGTCGGTTAACCACGATTCTATATTTACGGGTTTTGATGATTTTGGTGGGGATTTCTACCTGCCAGAGATGCCGAGTTACGATTATGAAGAGGAGAATTTGGATGGTTTGATAATTGACGACACTTTCTTGTGGAGTTTCTGA 633 0.5166 MVKQNNNVEKLASMERSDLKYKGVRKRKWGKYVSEIRLPNSRQRIWLGSYDTAEKAARAFDAAMFCLRGAAAKFNFPGAPPEIAGGRYMTPPQIQAAAARYANSDPVRPCSTSTETSTMLSEETKTVMPTSASPSPSPSDVTLQTECDVTAMNGSGSDLFTTIGSVNHDSIFTGFDDFGGDFYLPEMPSYDYEEENLDGLIIDDTFLWSF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03069 210 Gene3D AP2/ERF domain 20 78 IPR036955 GO:0003700|GO:0006355
Arst3g03069 210 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 139 - -
Arst3g03069 210 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Arst3g03069 210 MobiDBLite consensus disorder prediction 101 141 - -
Arst3g03069 210 Pfam AP2 domain 20 69 IPR001471 GO:0003700|GO:0006355
Arst3g03069 210 FunFam Ethylene-responsive transcription factor 2 20 78 - -
Arst3g03069 210 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Arst3g03069 210 SUPERFAMILY DNA-binding domain 20 77 IPR016177 GO:0003677
Arst3g03069 210 CDD AP2 20 77 IPR001471 GO:0003700|GO:0006355
Arst3g03069 210 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Arst3g03069 210 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Arst3g03069 210 MobiDBLite consensus disorder prediction 106 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03069 Arst-Chr3 50598487 50599551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03069 1 210 AP2-EREBP Transcription Factor Family AT1G74930 45.581 6.79e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst3g03069 AP2 1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03069 - - gmx:732656 228.024