Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03065 ATGTCTAGTTCGTCGGAATACTCGGAATTTTCCGGCCAGAAGCCGGCGAGGTCACCGGAAAAATCGAGCTTCTCTCAGACTTGCAGTTTGTTGAGTCAATACATCAAAGAAAAGGGCAACTTTGGAGATCTTACCCTCGGTATCACATGCAACACCGAACCAAGTGGGTCACCTGAAACATCGTGTCAGTCTGCAACAACTATGAACCTATTTCCTACCAAAGAAAACAACGTTGCACCAAAAAGCCTCACACTCACTGGCACAGCCATGGGTTTGCTCTCTCCACAAGGTGCTTATCGTGCCAATCTTCCCTCTGAAGAAATTCCAAACTTGATCAATTCCAGTGCAGTTAAGTCTGTGAGCAAGGGCCTGAAAACTGCACAATTGACAATCTTCTATAATGGTCAAGTTGTTGTGCTCGATGATTGTCCTGCTGAGAAGGCGAACGAGCTCATGGCTTTTGCCAAGAAAGGAGTCTCTCAAACCCAGAACAACTCTGTCTACACCTACACTCAGAGCCAGCCTTCATTTCCTCCTAATTTGGCCAGAACATCTGCTGCTGATTCGAGTGCTCAAGCCTTTCCTAACGTGAATATTGTTGCAAGTTCCGGTAGCAGTTCGATCCACGAGCACTCAAAACCTCAGTCCAGACCTGTTGTTTGTGATCTACCAATTGCAAGAAAAGCTTCGCTTCATCGGTTCCTGGAGAAGAGAAAGGATAGAATTGCATCAAAGGGTCCATATCAAGCAGCAAATCCCATTGGGAGCGCTAACAAGCCAGCTGAATCCATGTCATGGCTTGAGTTGGGTGCTAAATCTCAAGAATGA 828 0.4626 MSSSSEYSEFSGQKPARSPEKSSFSQTCSLLSQYIKEKGNFGDLTLGITCNTEPSGSPETSCQSATTMNLFPTKENNVAPKSLTLTGTAMGLLSPQGAYRANLPSEEIPNLINSSAVKSVSKGLKTAQLTIFYNGQVVVLDDCPAEKANELMAFAKKGVSQTQNNSVYTYTQSQPSFPPNLARTSAADSSAQAFPNVNIVASSGSSSIHEHSKPQSRPVVCDLPIARKASLHRFLEKRKDRIASKGPYQAANPIGSANKPAESMSWLELGAKSQE 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03065 275 MobiDBLite consensus disorder prediction 241 275 - -
Arst3g03065 275 Pfam Jas motif 224 249 IPR018467 -
Arst3g03065 275 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 258 IPR040390 -
Arst3g03065 275 MobiDBLite consensus disorder prediction 1 23 - -
Arst3g03065 275 Pfam tify domain 126 155 IPR010399 -
Arst3g03065 275 ProSiteProfiles Tify domain profile. 122 157 IPR010399 -
Arst3g03065 275 SMART tify_2 122 157 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03065 Arst-Chr3 50482368 50485052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03065 1 272 Tify Gene Family AT1G19180 39.636 7.14e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Arst3g03065 tify 2.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03065 K13464 - gmx:100801449 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03065 3 50482368 50485052 Arst3g03065 3 50482368 50485052 ECH
Arst1g02629 1 88172850 88174252 Arst3g03065 3 50482368 50485052 PCT