Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03046 ATGGCATTAAAAGAGAAAGGTATTTGTGCTGAATTTCTCTCCTCAACAATATCAACTGAGGCAAAAAATAAGATTCATGACGATCTTGATTCTGGAAAACCCTCTACAAGGCTGCTATATGTGACTCCAGAGTTGATAGCAACAGCGGGGTTTATGCCAAAGCTGAAAAAGATTTACGCTAGGGGGCTGCTAAGTCTCATTGCCATAGATGAGGCACATTGCATCTCAAGTTGGGGCCATGATTTCAGACCAAGTTACCGTCAACTTTCATTGTTGAGAAGCCACCTACCAGATGTTCCAATATTAGCTCTAACTGCTACTGCTGCTCCTAAGGTTCAGAAGGATGTTGTACAGTCTTTGCATTTGCAAAATCCATTAATTCTTAAATCTTCTTTTAACCGTCCTAATATCTATTATGAAGTTCGATATAAAGATCTTCTGGATGATGCTTATGCCGATTTATCTAATACATTAAAATCTAAGGGAGATGTTTGTGCAATAGTTTACTGTCTTGAACGTTCAATGTGTGATGAATTGTCAGCTCATCTATCCCAAAATGGCATTTCCTGTGCTGCTTATCATGCAGGATTGAATAAGAAAATGCGAACGTCTGTGTTAGATGAGTGGATTTCTTCCAAAATACAAGTTGTTGTTGCCACTGTTGCTTTCGGGTATGGGATTGATAGAAAGGATGTAAGAATTGTATGCCACTTCAATATTCCCAAGTCAATGGAAGGATTTTATCAAGAGTCAGGCAGAGCAGGTCGTGATCAACTGCCCTGTACAAGTCTGCTGTACTACGGGGTAGATGATCGCAAAAGAATGGAATTCATATTAAGAAATTCAGGAAGCAAGAAATCCCAATCATCTACTTCACAGGAAGAATCATCAAAAAAGTCAATGGCTGACTTTACCCAGATGGTTGAATATTGTGAAGGATCTGGATGTCGTAGGAAAAGGATTCTCGAGAGTTTTGGGGAGAAGGTTACTGCATCCCTGTGTGAAAAAACATGTGATGCTTGCAGACATCCAAACTTAGTTGCCCGAAATTTGGAGGATCTGACAACTGCCATTGCTCTGCGCCAGAAAGGCGGTTCTTCTCGAATTTTCATCACCAGTTCTTCTGATGCAATCAACGGAGAACAGTTATCTGAATTCTGGAATCGTGGTGATGAAGCAATTGGCTCAGATGATGATATATCTGACTCCGATGATGGTAATGAGGTTGTCAACAACCTAACCAAGTCAAAGCTTCATTCTAGAGTGGGAGTAAATGAAAAGCTTGCTATGTTAGAACGTGCAGAAGAAAACTTCTATCGAAATGAGAAAGCTAAGAAACAGAGTAAAGTTGACAAGAATGCTATTTCTGATGCAATGCGAGAATCAAGCAGGCAAAGATTACAAAATGCTCTGAAACAGGCTCAGCAGCGACTTGACAACTTAAAGATTGAGTTGGAGACATCAGCATCTTTCCTTGAAGATGAATGCTACAAGAAATATAGCAAAACTGGCAAATCATTCTATTATTCACAAGTGGCGAGCACGGTTAGGTGGCTGGCAACGACAAGTTCTGTTGATATGTTGAACCGACTTGGCACAATGAAGGAATCTACATCAATGGATGCTGTTCCTGAAGCTGAAGGTCGCACCCCACCACATGCTATAGATCATTCTGGAAAGGAAGGTACAAGTAATGAACTCTCGGGCAATGCTCAGTCAGAAATTTTGCCTTGCGGTGACAGGGGCATGCCAGTAGAAAGTTCTTCCGTTAATACAAAGCTGCCACAGATTCCGTCGTTCTATGAATTTGTTAATAGTAGGAAAACAAAAGGTGACCAATTAGATGACACAAAAAAGAACTCATCTAGAGTAGAAAAGAAAATGAGAGTACAGTAG 1896 0.404 MALKEKGICAEFLSSTISTEAKNKIHDDLDSGKPSTRLLYVTPELIATAGFMPKLKKIYARGLLSLIAIDEAHCISSWGHDFRPSYRQLSLLRSHLPDVPILALTATAAPKVQKDVVQSLHLQNPLILKSSFNRPNIYYEVRYKDLLDDAYADLSNTLKSKGDVCAIVYCLERSMCDELSAHLSQNGISCAAYHAGLNKKMRTSVLDEWISSKIQVVVATVAFGYGIDRKDVRIVCHFNIPKSMEGFYQESGRAGRDQLPCTSLLYYGVDDRKRMEFILRNSGSKKSQSSTSQEESSKKSMADFTQMVEYCEGSGCRRKRILESFGEKVTASLCEKTCDACRHPNLVARNLEDLTTAIALRQKGGSSRIFITSSSDAINGEQLSEFWNRGDEAIGSDDDISDSDDGNEVVNNLTKSKLHSRVGVNEKLAMLERAEENFYRNEKAKKQSKVDKNAISDAMRESSRQRLQNALKQAQQRLDNLKIELETSASFLEDECYKKYSKTGKSFYYSQVASTVRWLATTSSVDMLNRLGTMKESTSMDAVPEAEGRTPPHAIDHSGKEGTSNELSGNAQSEILPCGDRGMPVESSSVNTKLPQIPSFYEFVNSRKTKGDQLDDTKKNSSRVEKKMRVQ 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03046 631 PANTHER DNA HELICASE RECQ FAMILY MEMBER 1 493 - -
Arst3g03046 631 MobiDBLite consensus disorder prediction 280 300 - -
Arst3g03046 631 MobiDBLite consensus disorder prediction 537 572 - -
Arst3g03046 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 362 IPR027417 -
Arst3g03046 631 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 146 298 IPR001650 -
Arst3g03046 631 MobiDBLite consensus disorder prediction 281 300 - -
Arst3g03046 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 126 IPR027417 -
Arst3g03046 631 FunFam RecQ family DNA helicase 134 359 - -
Arst3g03046 631 CDD SF2_C_RecQ 134 267 - -
Arst3g03046 631 Pfam Helicase conserved C-terminal domain 154 256 IPR001650 -
Arst3g03046 631 CDD DEXHc_RecQ 1 133 - -
Arst3g03046 631 NCBIfam RecQ family ATP-dependent DNA helicase 2 353 IPR004589 GO:0004386|GO:0006310
Arst3g03046 631 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 126 IPR014001 -
Arst3g03046 631 SMART helicmild6 177 258 IPR001650 -
Arst3g03046 631 MobiDBLite consensus disorder prediction 605 631 - -
Arst3g03046 631 Coils Coil 464 484 - -
Arst3g03046 631 MobiDBLite consensus disorder prediction 608 631 - -
Arst3g03046 631 Gene3D - 134 360 IPR027417 -
Arst3g03046 631 Gene3D - 1 133 IPR027417 -
Arst3g03046 631 Pfam RecQ zinc-binding 271 342 IPR032284 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03046 Arst-Chr3 48902728 48909395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03046 5 281 Eukaryotic Initiation Factors Gene Family AT3G19760 23.264 1.96e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03046 K10901 - gmx:100819601 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03046 3 48902728 48909395 Arst3g03046 3 48902728 48909395 ECH