Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02996 ATGATGAACAGTAGCAGCAGCAGCAGCAGTAGTAGTAGAAACAGTAGGTTTCCTTTCACCCCATCACAATGGCAAGAACTTGAACACCAAGCTCTAATATATAAATACATGGCTTCAGGTACCACTGTCCCTCCTGATCTTCTCTTCACTCTCAAAAGAAGCCATTTCAATTTGCCTCATCACCAACCAGCAGCTCAACAACAACACTTTGGATGGAACTATCTTGAAATGGGTTTGGGAAGAAAAATAGACCCGGAACCAGGAAGGTGCAGAAGAACAGATGGAAAAAAATGGAGGTGCTCAAAAGAGGCATACCCAGATTCAAAGTACTGTGAGAGGCACATGCACCGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAACTTTTGAAAACAACAACAAACGCATGCAATAGTGCTTCTTCAGCAACAACCCACACCATCATCTCATCACCATCATCAATCACTAAAACTAATCAGCACCCTCAACAACGTTCTTGCTATAATAATGGTTCCAATCTTCTTCATCAGCATTCCTTTGTCTTCAATTCCCACACTCCATCAAGGTCATCAACATCTGCTGTTGCTTTTTCATTTCAAGACAACACTGCTCCCTCCAGTAGGTATGTCTATGGAGTGAAAGAGGATGCGGATGAACGTGCTTTCTTCAAAGAACCTTCTAGCACATTGAAAAGCTTCTCTGGATCCTCCATTGACGATTCATGGCAACTCACACCATTGACCATAAGCACCTCATCTTCTTCTTCCTCCACAAAACAGAGGAGATGCACAAGTTTATCCAACAATATTGAGAGCCTCAATGAGCGCTCAAAAAATCAAGAACAAGATCAGAAGACTACTGTTCATAGCTTCTTTGATGAATGGCCCCACAAAGGCAGAGGATTTGATTCCGATGACAAATGTTCTTCCACAACCAAATTATCAATTTCCATTCCATCAACATCTTTTCATGACTTTCCCGTCCTTCAGTTCAAGAACCCACCTCACTGCTGA 1011 0.4243 MMNSSSSSSSSSRNSRFPFTPSQWQELEHQALIYKYMASGTTVPPDLLFTLKRSHFNLPHHQPAAQQQHFGWNYLEMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVELLKTTTNACNSASSATTHTIISSPSSITKTNQHPQQRSCYNNGSNLLHQHSFVFNSHTPSRSSTSAVAFSFQDNTAPSSRYVYGVKEDADERAFFKEPSSTLKSFSGSSIDDSWQLTPLTISTSSSSSSTKQRRCTSLSNNIESLNERSKNQEQDQKTTVHSFFDEWPHKGRGFDSDDKCSSTTKLSISIPSTSFHDFPVLQFKNPPHC 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02996 336 Coils Coil 262 282 - -
Arst3g02996 336 ProSiteProfiles QLQ domain profile. 18 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst3g02996 336 SMART QLQ_2 17 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst3g02996 336 Pfam WRC 85 127 IPR014977 -
Arst3g02996 336 PANTHER GROWTH-REGULATING FACTOR 5 7 321 IPR031137 GO:0005634|GO:0006351|GO:0032502
Arst3g02996 336 ProSiteProfiles WRC domain profile. 84 128 IPR014977 -
Arst3g02996 336 Pfam QLQ 18 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02996 Arst-Chr3 46400542 46403964 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02996 5 127 GRF Transcription Factor Family AT3G13960 62.016 2.81e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Arst3g02996 WRC 6.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02996 - - aip:107630472 599.742