Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02995 ATGATGAACAGTAGCAGCAGCAGCAGCAGTAGTAGTAGAAACAGTAGGTTTCCTTTCACCCCATCACAATGGCAAGAACTTGAACACCAAGCTCTAATATATAAATACATGGCTTCAGGTACCACTGTCCCTCCTGATCTTCTCTTCACTCTCAAAAGAAGCCATTTCAATTTGCCTCATCACCAACCAGCAGCTCAACAACAACACTTTGGATGGAACTATCTTGAAATGGGTTTGGGAAGAAAAATAGACCCGGAACCAGGAAGGTGCAGAAGAACAGATGGAAAAAAATGGAGGTGCTCAAAAGAGGCATACCCAGATTCAAAGTACTGTGAGAGGCACATGCACCGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAACTTTTGAAAACAACAACAAACGCATGCAATAGTGCTTCTTCAGCAACAACCCACACCATCATCTCATCACCATCATCAATCACTAAAACTAATCAGCACCCTCAACAACGTTCTTGCTATAATAATGGTTCCAATCTTCTTCATCAGCATTCCTTTGTCTTCAATTCCCACACTCCATCAAGGTCATCAACATCTGCTGTTGCTTTTTCATTTCAAGACAACACTGCTCCCTCCAGGTATGTCTATGGAGTGAAAGAGGATGCGGATGAACGTGCTTTCTTCAAAGAACCTTCTAGCACATTGAAAAGCTTCTCTGGATCCTCCATTGACGATTCATGGCAACTCACACCATTGACCATAAGCACCTCATCTTCTTCTTCCTCCACAAAACAGAGGAGATGCACAAGTTTATCCAACAATATTGAGAGCCTCAATGAGCGCTCAAAAAATCAAGAACAAGATCAGAAGACTACTGTTCATAGCTTCTTTGATGAATGGCCCCACAAAGGCAGAGGATTTGATTCCGATGACAAATGTTCTTCCACAACCAAATTATCAATTTCCATTCCATCAACATCTTTTCATGACTTTCCCGTCCTTCAGTTCAAGAACCCACCTCACTGCTGA 1008 0.4246 MMNSSSSSSSSSRNSRFPFTPSQWQELEHQALIYKYMASGTTVPPDLLFTLKRSHFNLPHHQPAAQQQHFGWNYLEMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVELLKTTTNACNSASSATTHTIISSPSSITKTNQHPQQRSCYNNGSNLLHQHSFVFNSHTPSRSSTSAVAFSFQDNTAPSRYVYGVKEDADERAFFKEPSSTLKSFSGSSIDDSWQLTPLTISTSSSSSSTKQRRCTSLSNNIESLNERSKNQEQDQKTTVHSFFDEWPHKGRGFDSDDKCSSTTKLSISIPSTSFHDFPVLQFKNPPHC 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02995 335 PANTHER GROWTH-REGULATING FACTOR 5 7 320 IPR031137 GO:0005634|GO:0006351|GO:0032502
Arst3g02995 335 ProSiteProfiles QLQ domain profile. 18 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst3g02995 335 SMART QLQ_2 17 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst3g02995 335 Pfam WRC 85 127 IPR014977 -
Arst3g02995 335 Coils Coil 261 281 - -
Arst3g02995 335 ProSiteProfiles WRC domain profile. 84 128 IPR014977 -
Arst3g02995 335 Pfam QLQ 18 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02995 Arst-Chr3 46400542 46403964 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02995 5 127 GRF Transcription Factor Family AT3G13960 62.016 2.88e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Arst3g02995 WRC 6.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02995 - - aip:107630472 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02995 3 46400542 46403964 Arst3g02995 3 46400542 46403964 ECH
Arst1g02663 1 88434049 88436046 Arst3g02995 3 46400542 46403964 PCT