Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02975 ATGGAGAACGGAGAGGAAAAAGGCGTGGCGGCACATAGAACAGTAGGGACAAAGAACGAGGTTGTTCTTCGAATTCCCGAGAGCGAAAACATCATTTCCTATTCTCCTCAGCAGAAGGGTTCACCCTCAAAAGCCTTCGTAGATTCTTCAAATGTTGAACTAGCAGCTGAACTTCAGAGTCTAAAAAACAGTAGTACTGTTCAATCTCCAACTGCTACCACTTCAACCCGCTCTGTTGGTCGTTCCGAATTCTCGAAGCCAAAATCTAGATTGGTGGAACCGCCACATCCAATAGCTGCAAGCTTTCTTGAAGACAAAACCCAAATCAAGAGCTTCAAATCACCCGCAAGGACTTCCACCAGCAAAAAGACTACTCCTAATGCCACACCTCCAAGGGATGTTCCTATTACCCCAAGAACCCCTTTGATTGGGACTCCAATGGAAGAAGAAGAAGAGGAGGAGGAGGAGTTTTACAAGACCACAAACGTTGAAGTGAGCAAGAAGAGATCTGGCAAGAGGTGGAAGTTCCTGTGTATGATTGAATGGGTTGGTTTTGTTTCCATAGTTGGGTTCTTGATTGTATCCTTAGCAATCAAAAGGTTGCGAAATTCCGAAATATGGGGCTTGGAGCTGTGGAAATGGTGTGTTCTTGCACTGGTTATCCTCTGTGGGAGACTTGTCACTGGGTGGTTTATAAATGTTATGGTTTTCTTGATTGAAAGGAATTTCTTGTTCAAGAAGAAGGTTCTGTATTTTGTTTATGGTGTGAAGAAGAGTGTTCAAGCATTTTTATGGTTGGGCATTGTTCTTATGGCATGGGGTTTGATTTTCAATCATGGGATTAAGAGATCAAGAAGAGTTAATAGGGTTCTTGATTACATTACAAGATCTCTTGCATCTTGTCTTATTGGGGCAGCTCTATGGTTGGCAAAAATGTTGCTGATTAAGCTACTAGCTTCGCATTTCCAATCGGCTAGGTTTTTCAACCGGATTCAAGAGTCAATTTTTCATCAATACATTCTTCGGACCCTTTCAGGGCCTCCCTTGATGGAAATTGCGGAAAATGTGGGAAAGAATTCAAGTAGCAGCCGGTTGAGTTTTAAGACTTTGGTTAGGGAGAATGGGAATGAAGAGAAGAAAGAAGAGGTCATTGATGTGGAGAAGCTCAAGAAAATGAAACAAGAGAAAGTTTCTGCTTTGACTATGAAAGGATTGATCAGTGTGATAAAGAGTTCTGGATTGACCACGATTCTGCCGCAGAGTGTTGATGAAGATGAGAATGAGCAGATAGATAGCGAGATTACTAGTGAGTTGGAAGCAAAGGAGGCAGCATATCGAATTTTCAGCAATGTAGCCAAGCCAGGAAGCAAGTACATTCAGAAGGAAGACCTATTGCGCTTCATGACCAATGAAGAAGTTGAAAACCTGCTTCCGTTATTTGAAGGAGCAGTTGCAACTGGAAGAATCAAGAGGAAGTCTCTCAAGAATTGGCTGGTGAAAGTCTACCAAGAGCGTCAATCCCTTGTGCATTCGCTAAATGATACAAAAACAGCTGTCGATGATTTGAACTTGCTTGCTTCCGTGCTCATCATTATTGTGATCATCATTGTTTGGTTGCTTATAATGGGGTTCCTCACAACCCATGTTCTTCTCTTTATTACATCTCAGCTTTTACTCGCGGTGTTTATATTTGGTAACTCAGCTAAGACTGTCTTTGAAGCTATTATATTTGTTTTCGTGAGGCATCCGTTTGATGTTGGCGATCGTTGTGTCATCGATGGTGTTCAGATGACTGTTGAGGAGATGAACATACTAACTACAATCTTCTTGAGATTTGACAATGAAAAGATTTCATATCCAAATTCAGTTCTAGCAAACAAGCCTATCAGTAACTTCTACAGGAGTCCAGAAATGAGCGAATCAATCGAATTTTCTGTCGATATGTCGACACCAATCGAGAGTATCGCAGCTCTGAAGTCAAGAATAAAATCATACTTGGAGAGCAAGCCGCAGCATTGGGGTCCGAACCATAGCGTGGTGGTTAAAGATATTGAGAATGTAGACAAGATGAAAATGGGACTCAATGTTAATCACACCATAAACTTTCAGAATTATGGGGATAAGAGCAGCAGAAGATCTGAATTACTCTTGGAGTTAAAGAAAATTCTTGAGGATATTAAGATTAAGTATCATCTTCTGCCACAAGAAGTTCATCTGAGTTATGTAAATTCCGAAAATTCGACAAAACAAACCGTTTGGAGATGA 2265 0.411 MENGEEKGVAAHRTVGTKNEVVLRIPESENIISYSPQQKGSPSKAFVDSSNVELAAELQSLKNSSTVQSPTATTSTRSVGRSEFSKPKSRLVEPPHPIAASFLEDKTQIKSFKSPARTSTSKKTTPNATPPRDVPITPRTPLIGTPMEEEEEEEEEFYKTTNVEVSKKRSGKRWKFLCMIEWVGFVSIVGFLIVSLAIKRLRNSEIWGLELWKWCVLALVILCGRLVTGWFINVMVFLIERNFLFKKKVLYFVYGVKKSVQAFLWLGIVLMAWGLIFNHGIKRSRRVNRVLDYITRSLASCLIGAALWLAKMLLIKLLASHFQSARFFNRIQESIFHQYILRTLSGPPLMEIAENVGKNSSSSRLSFKTLVRENGNEEKKEEVIDVEKLKKMKQEKVSALTMKGLISVIKSSGLTTILPQSVDEDENEQIDSEITSELEAKEAAYRIFSNVAKPGSKYIQKEDLLRFMTNEEVENLLPLFEGAVATGRIKRKSLKNWLVKVYQERQSLVHSLNDTKTAVDDLNLLASVLIIIVIIIVWLLIMGFLTTHVLLFITSQLLLAVFIFGNSAKTVFEAIIFVFVRHPFDVGDRCVIDGVQMTVEEMNILTTIFLRFDNEKISYPNSVLANKPISNFYRSPEMSESIEFSVDMSTPIESIAALKSRIKSYLESKPQHWGPNHSVVVKDIENVDKMKMGLNVNHTINFQNYGDKSSRRSELLLELKKILEDIKIKYHLLPQEVHLSYVNSENSTKQTVWR 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02975 754 Gene3D - 583 632 IPR023408 -
Arst3g02975 754 SUPERFAMILY Sm-like ribonucleoproteins 573 632 IPR010920 -
Arst3g02975 754 MobiDBLite consensus disorder prediction 113 130 - -
Arst3g02975 754 MobiDBLite consensus disorder prediction 113 141 - -
Arst3g02975 754 MobiDBLite consensus disorder prediction 60 82 - -
Arst3g02975 754 PIRSF Memb_At2g17000 9 752 IPR016688 -
Arst3g02975 754 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 25 747 IPR016688 -
Arst3g02975 754 Coils Coil 376 396 - -
Arst3g02975 754 MobiDBLite consensus disorder prediction 60 95 - -
Arst3g02975 754 Pfam Mechanosensitive ion channel 526 729 IPR006685 GO:0016020|GO:0055085
Arst3g02975 754 FunFam Predicted mechanosensitive ion channel 583 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02975 Arst-Chr3 44880853 44884422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02975 68 743 Mechanosensitive Ion Channel Family AT5G12080 51.391 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02975 K22048 - gmx:100777332 941.028