Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02971 ATGCTGACTTGCATAGCTCGGCCGAAGAAACTCGGGGAAGACTCACTGAGTCACCCGGACGATCCCAATTCCAGCATCGGAAAGAATCAATCCGTCAAGTCCATCACCTCTCAGTTAAAGGATATGGCGTTGAAGGCGTCGGGTGCGTACAAGAACTGCAGTCCGTGCGCGCCGCCGAGTCGACTCAGGACAGCCAGTGGAGTGGGCGGTGCCAGTATTGGAAGCGGTGGAGACTCGGATGGGGACTCGGATCGGTTCCGGTGGTCGTACAGACGGACAGGGAGCTCAAGCTCGTCGGCGGGGACAAGGACAGGGTGGGGAAAGGAGATGGAGGNGACGCCGAGCTCCGCCGGAGGGAGCGGGCGGAGGGCGGAGCCGGTGGTGGTGCTAGTGGAGGAGAACGAGCCGAAGGAGTGGGTGGCGCAGGTGGAGCCCGGCGTCTTGATCACGTTCGTGTCGCTTCCCCGTGGCGGGAACGACCTCAAGCGCATACGATTCAGTCGGGAGATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGACAAGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCGCCAAGCTTTCCCTCTTCCAACTCCACCACGGTCTGAAGATGAGAGTTCAAAGCGTGAATCAATAGAAGACAGCCCTGTAACACCTCCACTAACCAAGGAACGGCTACCTCGAAATTTGTACCGCCCAACAGGGGTGGGAATGGGGTACTCATCCTCAGATTCCTTTGATCATCAGTCGATGCAATCCCGGCATTACAATGATTCAAACGGTCTGAACTCAACCCCAAAGGTTTCAACCATTAGCGCTGCCAAGACAGAGATGTCATCGATGGATGCTTCTATAAGTAGCTCATCCAGAGAAGTGGACCATTCCGGGGAACTATCAATGAGCAATGCTAGTGACTTGGAGACTGAATGGGTTGAGCAGGATGAACCTGGAGTCTACATTACCATTAGAGCACTCCCAGGTGGCAAACGGGAGCTCAAACGAGTGAGGTTCAGCCGAGAAAAATTTGGGGAGATGCATGCTCGACTTTGGTGGGAGGAGAATCGTGCCAGAATACATGAACAATACTTGTAA 1113 0.5382 MLTCIARPKKLGEDSLSHPDDPNSSIGKNQSVKSITSQLKDMALKASGAYKNCSPCAPPSRLRTASGVGGASIGSGGDSDGDSDRFRWSYRRTGSSSSSAGTRTGWGKEMEAXTPSSAGGSGRRAEPVVVLVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREIFNKWQAQRWWAENYDKVMELYNVQRLNRQAFPLPTPPRSEDESSKRESIEDSPVTPPLTKERLPRNLYRPTGVGMGYSSSDSFDHQSMQSRHYNDSNGLNSTPKVSTISAAKTEMSSMDASISSSSREVDHSGELSMSNASDLETEWVEQDEPGVYITIRALPGGKRELKRVRFSREKFGEMHARLWWEENRARIHEQYL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02971 371 Pfam Transcription factor BRX N-terminal domain 30 56 IPR027988 -
Arst3g02971 371 MobiDBLite consensus disorder prediction 244 275 - -
Arst3g02971 371 MobiDBLite consensus disorder prediction 18 41 - -
Arst3g02971 371 ProSiteProfiles BRX domain profile. 316 371 IPR013591 -
Arst3g02971 371 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Arst3g02971 371 Pfam Transcription factor regulating root and shoot growth via Pin3 315 370 IPR013591 -
Arst3g02971 371 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
Arst3g02971 371 MobiDBLite consensus disorder prediction 1 121 - -
Arst3g02971 371 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 371 IPR044532 -
Arst3g02971 371 MobiDBLite consensus disorder prediction 201 275 - -
Arst3g02971 371 MobiDBLite consensus disorder prediction 90 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02971 Arst-Chr3 44639389 44647293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02971 1 371 Major Intrinsic Protein MIP AT1G31880 44.271 8.57e-90 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02971 - - gmx:100794109 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02971 3 44639389 44647293 Arst3g02971 3 44639389 44647293 ECH
Arst1g02681 1 88528009 88532192 Arst3g02971 3 44639389 44647293 PCT