Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02947 ATGAAGAAAGGGTGCTTAGGACCCAATCTGAAGCTCACTGTTCCTGTTCCTGCAACTCATCACCCTTCTTTTCCAAGCTTCCTGAATGAAAGCGGCACGTTTATTGATGGGAACCTGCTTGTCAATGGCGACGGAGTTCTGATCGCTTCTCAGGGTGAAGTGGGAACTTTGTGTTGTTTTCAGCCACCCCCAGTAAGGGCAATAGACAACAAACTAAGTTTGGCAGACATTGACACAATCAAAGTGATTGGAAAGGGAAATGGAGGGATAGTGCAGTTGGTGCAACACAAATGGACTAATCAATTTTTCGCATTAAAGGAAATCCGAATGATGGTTGAGGAGCCTATGCACACGCAGATAGCACGAGAGCTAAAAATCAATCAGTCGGCACAATGTCCATATGTTGTTGTCTACTACCAATCATTCTACAATAATGGGGTCTTATCAATCATCTTAGAGTACATGGATGGAGGGTCCTTGGAAGATTTTCTTAGCATAGTGAAAACAATTCCAGAGCCATATCTTGCCGCGATCTGCAAGCAGGTGCTGAAGGGTTTAATTTATCTTCATCATGAAAAACATATTATCCATAGGGACTTAAAGCCTTCTAATTTGTTGATAAATCATAGAGGAGAAGTAAAGATTACTGATTTTGGTGTGAGCGCAATCATGGACACCACATCTGGTCTAGCTAATACTTTTATTGGCACATACAGCTACATGTCTCCAGAGAGAATTACTGGAAACCCTGGTGGTTACAACTATAGAAGTGATATATGGAGCTTGGGACTGATATTGCTCAAGTGTGCTACAGGAAAGTTTCCATATACACCACCTGATAAAAAAGAAGGATGGGAAAATATCTACCAGCTTATTGAAATCATTGTCGAAAAACCTCCGCCGAGTGCTCCATCTGATCAATTTTCTCTGGAATTTTGTTCTTTCATCTCTGCATGTTTACAGAAAAATCCAAGGGATAGAAAGTCAGCTCCAGACCTTGCGAGACATCCATTTATCAACATGTATGAGGACTTGGATGTGGACCTTTCAGCATACTTCTCCAATGGAGGATCTACACCTGCAACCATATAA 1092 0.4148 MKKGCLGPNLKLTVPVPATHHPSFPSFLNESGTFIDGNLLVNGDGVLIASQGEVGTLCCFQPPPVRAIDNKLSLADIDTIKVIGKGNGGIVQLVQHKWTNQFFALKEIRMMVEEPMHTQIARELKINQSAQCPYVVVYYQSFYNNGVLSIILEYMDGGSLEDFLSIVKTIPEPYLAAICKQVLKGLIYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMDTTSGLANTFIGTYSYMSPERITGNPGGYNYRSDIWSLGLILLKCATGKFPYTPPDKKEGWENIYQLIEIIVEKPPPSAPSDQFSLEFCSFISACLQKNPRDRKSAPDLARHPFINMYEDLDVDLSAYFSNGGSTPATI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02947 363 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Arst3g02947 363 CDD PKc_MAPKK_plant_like 75 343 - -
Arst3g02947 363 FunFam Mitogen-activated protein kinase kinase 1 61 156 - -
Arst3g02947 363 Gene3D Transferase(Phosphotransferase) domain 1 157 359 - -
Arst3g02947 363 Gene3D Phosphorylase Kinase; domain 1 65 156 - -
Arst3g02947 363 FunFam Mitogen-activated protein kinase kinase 6 158 358 - -
Arst3g02947 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Arst3g02947 363 ProSiteProfiles Protein kinase domain profile. 77 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02947 363 Pfam Protein kinase domain 79 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02947 363 SUPERFAMILY Protein kinase-like (PK-like) 75 344 IPR011009 -
Arst3g02947 363 SMART serkin_6 77 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02947 363 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 19 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02947 Arst-Chr3 43622396 43625891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02947 30 358 MAP Kinase Kinase Gene Family AT4G26070 63.526 1.62e-155 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Arst3g02947 Pkinase 5.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02947 K20603 - gmx:100789241 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02947 3 43622396 43625891 Arst3g02947 3 43622396 43625891 ECH
Arst1g02696 1 88610669 88614330 Arst3g02947 3 43622396 43625891 PCT