Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02940 ATGATAGTGGTCACAAAGATCAAAGAGAGGAGAGAAAACGGCAATTTCGGAGCAGAAAATGAAGAATTGGAGTGCAGAATCGGAAAGAGCTCACCAAAAAATCTTAGGGAGGGTCCCGCTTGTCTACCACGTCAGCACTACGTCAGCAAGACAATGACACATGACAGCACCTTAGTGGACGAGAGAGACACGCTGGCGGTGAGGTGGAGGCACGGGTCTGCTGCGGGATCTCTATTTCTGTTTATCTTCCTCGTCCTATCAAAAAAGGATCATCGAGAAGAGGAAAGGGAAGAAGGGAAGGTGAAAGAAGCCATGGCAGTTGACGACGAGGAAGAAAAAGAAGATGACGACGAGGAAGAAGAAGAGGGAGAGGAAGAGGAAGAGGAAGAAGGAACCACAGGTTCGAGTTTGACCATGGAGAGGGTTGCTGTAGCTAAGGAATTCATTGAAAACCATTACAAGGCTCATATGAAACATATCCAAGATCGCAAAGAAAGGCGTTTAGTACTAGAAAAGAAGCTAGCATCTTCTCATGTACCAGAAGAGGAACAAATCAATCTATTAAAAGATTTAGAGCGAAAGGAGACGGAGTATATCCGATTAAAAAGAAACAAAATATGTGTTGATGATTTTGACCTTCTAACAATTATTGGCAGAGGAGCCTTTGGCGAGGTAAGACTCTGTCGGGAGAAGAAATCAGGTCACATATACGCCATGAAAAAGTTGAAGAAGTCTGAAATGCTCCGTAGGGGACAGGTTGAGCATGTTAGAGCGGAAAGGAATGTACTTGCAGAAGTTGCAAGTGAGTGCATTGTGAAGCTCTATTACTCTTTTCAAGATGATGAATACTTATATCTTATAATGGAGTATTTACCTGGTGGTGATATAATGACTTTGCTTATGAGAGAGGAAATTTTGACCGAAACTATGGCCAGATTTTACATTGCGCAAACTGTTTTGGCAATAGAGTCTATTCATAAACACAATTACATTCATCGAGACATAAAACCTGATAACCTTCTATTGGACAAAAATGGTCATATGAAGCTCTCTGATTTTGGTCTTTGCAAGCCACTTGACTGTTCTAATTTATCATCTATAAATGAAAATGAAGTTCTGGATGATGAGAACTTGAATGATACCATGGATATTGATGGATCCAACCCAAATAAAAGAAATGGAAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAACATTGGCAAATGAATCGGAGGAAGTTGGCATTTTCCATGGTTGGTACTCCGGACTATATTTCTCCCGAGGTGCTACTAAAAAAAGGCTATGGTGCAGAATGTGACTGGTGGTCTCTTGGTGCTATATTGTATGAGATGCTTATTGGTTATCCTCCATTTTATTCTGATGACCCTATAACAACATGTAGAAAGATTGTGCATTGGAAAAATCACTTAAAATTTCCAGTTGAGATAAGGTTGAGTCCAGAAGCAAGGGATCTAATATGTAGGTTACTTGTTGATGCTCCACAAAGGCTTGGTACTAATGGAGCTTATGAAATTAAAGCTCATCCTTGGTTCAAAAATGTTGAATGGGATAGGCTTTATGAAATGGAGGCAGCATTTATACCACAGGTCGATGGAGAGCTTGACACTCAAAATTTTATGAAATTTAATGAGGTTGAAGCAGAACAACCAAAACCAACTAGAAGCGCATCAGGACCGATCAGAAAAAAATTGTTAACTCCTCAAGATCTCAGTTTTGTTGGCTATACATATAAAAATTTTGCTGCTATTAAGGGAACACGCCATTCTATTGATATGTTGTCTTTGTCAACCCCACAACGCACATCATCCATTGACTCTACACAAAGTGATTCTGCAATTGACTATTCCACATGA 1875 0.4021 MIVVTKIKERRENGNFGAENEELECRIGKSSPKNLREGPACLPRQHYVSKTMTHDSTLVDERDTLAVRWRHGSAAGSLFLFIFLVLSKKDHREEEREEGKVKEAMAVDDEEEKEDDDEEEEEGEEEEEEEGTTGSSLTMERVAVAKEFIENHYKAHMKHIQDRKERRLVLEKKLASSHVPEEEQINLLKDLERKETEYIRLKRNKICVDDFDLLTIIGRGAFGEVRLCREKKSGHIYAMKKLKKSEMLRRGQVEHVRAERNVLAEVASECIVKLYYSFQDDEYLYLIMEYLPGGDIMTLLMREEILTETMARFYIAQTVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSSINENEVLDDENLNDTMDIDGSNPNKRNGRRWKSPLEQLQHWQMNRRKLAFSMVGTPDYISPEVLLKKGYGAECDWWSLGAILYEMLIGYPPFYSDDPITTCRKIVHWKNHLKFPVEIRLSPEARDLICRLLVDAPQRLGTNGAYEIKAHPWFKNVEWDRLYEMEAAFIPQVDGELDTQNFMKFNEVEAEQPKPTRSASGPIRKKLLTPQDLSFVGYTYKNFAAIKGTRHSIDMLSLSTPQRTSSIDSTQSDSAIDYST 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02940 624 ProSiteProfiles AGC-kinase C-terminal domain profile. 519 594 IPR000961 GO:0004674|GO:0005524|GO:0006468
Arst3g02940 624 SMART pkinase_C_6 519 586 IPR000961 GO:0004674|GO:0005524|GO:0006468
Arst3g02940 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 330 342 IPR008271 GO:0004672|GO:0006468
Arst3g02940 624 SMART serkin_6 211 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02940 624 ProSitePatterns Protein kinases ATP-binding region signature. 217 240 IPR017441 GO:0005524
Arst3g02940 624 Gene3D Transferase(Phosphotransferase) domain 1 297 535 - -
Arst3g02940 624 Gene3D Phosphorylase Kinase; domain 1 202 296 - -
Arst3g02940 624 PANTHER SERINE/THREONINE-PROTEIN KINASE 99 566 - -
Arst3g02940 624 FunFam Non-specific serine/threonine protein kinase 417 536 - -
Arst3g02940 624 ProSiteProfiles Protein kinase domain profile. 211 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02940 624 MobiDBLite consensus disorder prediction 93 137 - -
Arst3g02940 624 CDD MobB_NDR_LATS-like 145 206 - -
Arst3g02940 624 MobiDBLite consensus disorder prediction 93 107 - -
Arst3g02940 624 Pfam Protein kinase domain 213 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02940 624 Pfam Protein kinase domain 409 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02940 624 MobiDBLite consensus disorder prediction 108 133 - -
Arst3g02940 624 Coils Coil 107 127 - -
Arst3g02940 624 MobiDBLite consensus disorder prediction 604 624 - -
Arst3g02940 624 SUPERFAMILY Protein kinase-like (PK-like) 208 564 IPR011009 -
Arst3g02940 624 CDD STKc_NDR_like 209 585 - -
Arst3g02940 624 FunFam Non-specific serine/threonine protein kinase 172 294 - -
Arst3g02940 624 FunFam Non-specific serine/threonine protein kinase 295 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02940 Arst-Chr3 43441667 43458790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02940 122 623 AGC Kinase Gene Family AT2G19400 73.016 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Arst3g02940 Pkinase 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02940 K08790 - gmx:100802177 828.935