LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g02940	ATGATAGTGGTCACAAAGATCAAAGAGAGGAGAGAAAACGGCAATTTCGGAGCAGAAAATGAAGAATTGGAGTGCAGAATCGGAAAGAGCTCACCAAAAAATCTTAGGGAGGGTCCCGCTTGTCTACCACGTCAGCACTACGTCAGCAAGACAATGACACATGACAGCACCTTAGTGGACGAGAGAGACACGCTGGCGGTGAGGTGGAGGCACGGGTCTGCTGCGGGATCTCTATTTCTGTTTATCTTCCTCGTCCTATCAAAAAAGGATCATCGAGAAGAGGAAAGGGAAGAAGGGAAGGTGAAAGAAGCCATGGCAGTTGACGACGAGGAAGAAAAAGAAGATGACGACGAGGAAGAAGAAGAGGGAGAGGAAGAGGAAGAGGAAGAAGGAACCACAGGTTCGAGTTTGACCATGGAGAGGGTTGCTGTAGCTAAGGAATTCATTGAAAACCATTACAAGGCTCATATGAAACATATCCAAGATCGCAAAGAAAGGCGTTTAGTACTAGAAAAGAAGCTAGCATCTTCTCATGTACCAGAAGAGGAACAAATCAATCTATTAAAAGATTTAGAGCGAAAGGAGACGGAGTATATCCGATTAAAAAGAAACAAAATATGTGTTGATGATTTTGACCTTCTAACAATTATTGGCAGAGGAGCCTTTGGCGAGGTAAGACTCTGTCGGGAGAAGAAATCAGGTCACATATACGCCATGAAAAAGTTGAAGAAGTCTGAAATGCTCCGTAGGGGACAGGTTGAGCATGTTAGAGCGGAAAGGAATGTACTTGCAGAAGTTGCAAGTGAGTGCATTGTGAAGCTCTATTACTCTTTTCAAGATGATGAATACTTATATCTTATAATGGAGTATTTACCTGGTGGTGATATAATGACTTTGCTTATGAGAGAGGAAATTTTGACCGAAACTATGGCCAGATTTTACATTGCGCAAACTGTTTTGGCAATAGAGTCTATTCATAAACACAATTACATTCATCGAGACATAAAACCTGATAACCTTCTATTGGACAAAAATGGTCATATGAAGCTCTCTGATTTTGGTCTTTGCAAGCCACTTGACTGTTCTAATTTATCATCTATAAATGAAAATGAAGTTCTGGATGATGAGAACTTGAATGATACCATGGATATTGATGGATCCAACCCAAATAAAAGAAATGGAAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAACATTGGCAAATGAATCGGAGGAAGTTGGCATTTTCCATGGTTGGTACTCCGGACTATATTTCTCCCGAGGTGCTACTAAAAAAAGGCTATGGTGCAGAATGTGACTGGTGGTCTCTTGGTGCTATATTGTATGAGATGCTTATTGGTTATCCTCCATTTTATTCTGATGACCCTATAACAACATGTAGAAAGATTGTGCATTGGAAAAATCACTTAAAATTTCCAGTTGAGATAAGGTTGAGTCCAGAAGCAAGGGATCTAATATGTAGGTTACTTGTTGATGCTCCACAAAGGCTTGGTACTAATGGAGCTTATGAAATTAAAGCTCATCCTTGGTTCAAAAATGTTGAATGGGATAGGCTTTATGAAATGGAGGCAGCATTTATACCACAGGTCGATGGAGAGCTTGACACTCAAAATTTTATGAAATTTAATGAGGTTGAAGCAGAACAACCAAAACCAACTAGAAGCGCATCAGGACCGATCAGAAAAAAATTGTTAACTCCTCAAGATCTCAGTTTTGTTGGCTATACATATAAAAATTTTGCTGCTATTAAGGGAACACGCCATTCTATTGATATGTTGTCTTTGTCAACCCCACAACGCACATCATCCATTGACTCTACACAAAGTGATTCTGCAATTGACTATTCCACATGA	1875	0.4021	MIVVTKIKERRENGNFGAENEELECRIGKSSPKNLREGPACLPRQHYVSKTMTHDSTLVDERDTLAVRWRHGSAAGSLFLFIFLVLSKKDHREEEREEGKVKEAMAVDDEEEKEDDDEEEEEGEEEEEEEGTTGSSLTMERVAVAKEFIENHYKAHMKHIQDRKERRLVLEKKLASSHVPEEEQINLLKDLERKETEYIRLKRNKICVDDFDLLTIIGRGAFGEVRLCREKKSGHIYAMKKLKKSEMLRRGQVEHVRAERNVLAEVASECIVKLYYSFQDDEYLYLIMEYLPGGDIMTLLMREEILTETMARFYIAQTVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSSINENEVLDDENLNDTMDIDGSNPNKRNGRRWKSPLEQLQHWQMNRRKLAFSMVGTPDYISPEVLLKKGYGAECDWWSLGAILYEMLIGYPPFYSDDPITTCRKIVHWKNHLKFPVEIRLSPEARDLICRLLVDAPQRLGTNGAYEIKAHPWFKNVEWDRLYEMEAAFIPQVDGELDTQNFMKFNEVEAEQPKPTRSASGPIRKKLLTPQDLSFVGYTYKNFAAIKGTRHSIDMLSLSTPQRTSSIDSTQSDSAIDYST	624

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Arst3g02940	624	ProSiteProfiles	AGC-kinase C-terminal domain profile.	519	594	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
Arst3g02940	624	SMART	pkinase_C_6	519	586	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
Arst3g02940	624	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	330	342	IPR008271	GO:0004672\|GO:0006468
Arst3g02940	624	SMART	serkin_6	211	518	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Arst3g02940	624	ProSitePatterns	Protein kinases ATP-binding region signature.	217	240	IPR017441	GO:0005524
Arst3g02940	624	Gene3D	Transferase(Phosphotransferase) domain 1	297	535	-	-
Arst3g02940	624	Gene3D	Phosphorylase Kinase; domain 1	202	296	-	-
Arst3g02940	624	PANTHER	SERINE/THREONINE-PROTEIN KINASE	99	566	-	-
Arst3g02940	624	FunFam	Non-specific serine/threonine protein kinase	417	536	-	-
Arst3g02940	624	ProSiteProfiles	Protein kinase domain profile.	211	518	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g02940	Arst-Chr3	43441667	43458790	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst3g02940	122	623	AGC Kinase Gene Family	AT2G19400	73.016	0.0	759

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_NDR	Arst3g02940		Pkinase	1e-43	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g02940	K08790		-	gmx:100802177	828.935

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