Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02933 ATGATTTCAATTTATTCAGAGAGGATGGGGTCCTGCAGCCGTGTTGTAGAGGGAACGTGCCAGTGGAATGTGAGGAGCAGGGATGATTGGGTTCAACGCAGCGGTGTAGGTTTAGATGAGCAGGAAACATTATATGACATGGGAATTGAAGCAGAGGAATACTTTCGTGACTATGCAAGTAAGGATGATGGTCGTAACGAAGGGTTCGATTCGGATGAAGGAGTGGGGCCAGATGATGTCCTTCGAATGGAATTTAACACTCCAGATGAAGCCAAATCCTTTTATAATAACTATAGCCGATTAAAGGGATTTTCTACGAGGCAAGGGAGGAAGGTAACAAATACTGCAGGGGATATTGTGCGATACACATTTGTGTGCAATAGGCAAGGGTATCGGGAGAAGAAATGGCTACAGATGGCTAATCGAAAACGGGAGCACAAGATTATGACTCGTTGTGGTTGCCTTGCCGAGATGAGGATAAAGAGAAAAGATGGGAGTGGCAAATGGTACGTGTCTCGGTTTGTGGATGAGCATAATCATGAACTCGCATCTGGCAAGTTCGTCGATTACTTGAGGTCGCACAGGCGGCTATCTGAAGTAGAGATTGCACAAATGACTAGCTTGAGGGAGGTTGGTATCAGCATTCCTAAAATATATGAATCCTTCGCGGCACAGCTTGGGGGTTTTAACCTTGTGACATTCACAAAGCAAGACATGTATAATGAGGTGAGGCGACAAAGAGAACTGCAAAATGGAGATGTAAGCGCTGCAATTCGATACTTGGAAGGTGTTTCCCGTGTAGACAACAGAATATTTTGGAGGTACAAGGTTGGGTCTGAAAACAATCTTTGTGACCTATTTTGGAGTGACGGGCGCAGTCAGTTCGACTATGCAATATTCGGAGATGTTCTAGCCTTCGATGCTACTTATGGCCGAAACAAGTACAATTTGCCTGTTGTTGTGTTCTCGGGAGTTAACCACCACAACCAAACATGTGTCTTCGGATGTGCAATGGTCTCGTGTGAAACACAAGAGTCCTACATCTGGGTTTTGCGGCAGTTTTTGGAATGCATGGAAGGAAAGGCCCCTAAGGCAGTCATCACAGATGGAGATACCTCGATGCGAAATGCTATACGTCATGTATTTCCCGAAACCCATCACAGGCTATGTGCTTGGCATTTGCTTCGTAATGCGACTTCCAATATATGTGACTCACGATTCACCCAGCTATTTAGACACTGCATGCTTGCGGACATGGAGGTTGATGAGTTCGAGGCGCAATGGGAGGCAATGCTGGATGAGTGTGGGGTTCGTGAAGTCGAATGGGTGAAGGATTTGTACCGCAAAAAAACTGCATGGGCGACAGCATACATCAGAGGCCAATTTTTTGCTGGAATACGGACAACGTCCCGTTGTGAATCTCTACATGCCAAGCTGGGCAGGTTTGTGGAGAGTAGATACGGGGTCCTTGAATTTGTCACAAACTTCCAAAGATGCATTGATTTCTTGCGAGACAATGAGGACGAGCTTGAATTTCGTTCATGGTACGGAACTCCAGTCTTGCAAACTGAGTTTGTTGAGCTTGAGAAGGATGGGTGGACAAAGTATACTCGGGAGATGTTTTGGCGATTTCGTGAAGCTCTTAAAAGGTGCATTCGAATTCACATATGTGGATGCAATGAAAATGCTGATGGTGAAGTATATGTTGTTCAAAAATATCGCAGGCCGGAAAAGAAGTGGGAGGTTTTGAGGCAAAATGTGGGTAACAAATTCAGCTGCACCTGCCTGAGAATGGAATCATTCGGACTGCCCTGTCTCCACATACTAGCTGTGTTGGTGCGCTTGGATTATACTATCATTCCCAATACGCTTGTGCTCCGCAGATGGTCGAAGATAGCAAAGTTGCACTATGGCTTAAATTGCACTAGAAATGAAACACAGGAGCAAACAACAACGTATAGGTCCCGGTTAGGAGCTTTTGCTCAGCTATGCACACGACTTGGCCGGGTTGCATGCATGAGCGATGAGGACTTTAAGTACTACTCACATAAGGTACTAACTGACACTATCTGCCTGGAAATTAAGAATGGCCTCAGGCCCCCGGAAGACGTAGGACTAACGGCGGAGGAACAACGAGTGAAGGACCCCATCAGCGTGAGAACAAAGGGTACTGGTCGACTCAGCCAGGCATCTGCATCGACCGGGAAAAAACGACGCAAGTGTAGCAACTGTGGCCGACTCGGTCATCGAAGGACCCGTTGTCCAAATCGTGCAGGTCAGGAGGGTGGCCAACCGTGTGTGGGCGTGAATAAGAGAGTTCGAGGTACCCAGGTGGTGCAGGAGGATGCTCCTTCCAACAACCCGGAGGCTGTGTCACTTGGCGACCTTTGA 2391 0.4705 MISIYSERMGSCSRVVEGTCQWNVRSRDDWVQRSGVGLDEQETLYDMGIEAEEYFRDYASKDDGRNEGFDSDEGVGPDDVLRMEFNTPDEAKSFYNNYSRLKGFSTRQGRKVTNTAGDIVRYTFVCNRQGYREKKWLQMANRKREHKIMTRCGCLAEMRIKRKDGSGKWYVSRFVDEHNHELASGKFVDYLRSHRRLSEVEIAQMTSLREVGISIPKIYESFAAQLGGFNLVTFTKQDMYNEVRRQRELQNGDVSAAIRYLEGVSRVDNRIFWRYKVGSENNLCDLFWSDGRSQFDYAIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGCAMVSCETQESYIWVLRQFLECMEGKAPKAVITDGDTSMRNAIRHVFPETHHRLCAWHLLRNATSNICDSRFTQLFRHCMLADMEVDEFEAQWEAMLDECGVREVEWVKDLYRKKTAWATAYIRGQFFAGIRTTSRCESLHAKLGRFVESRYGVLEFVTNFQRCIDFLRDNEDELEFRSWYGTPVLQTEFVELEKDGWTKYTREMFWRFREALKRCIRIHICGCNENADGEVYVVQKYRRPEKKWEVLRQNVGNKFSCTCLRMESFGLPCLHILAVLVRLDYTIIPNTLVLRRWSKIAKLHYGLNCTRNETQEQTTTYRSRLGAFAQLCTRLGRVACMSDEDFKYYSHKVLTDTICLEIKNGLRPPEDVGLTAEEQRVKDPISVRTKGTGRLSQASASTGKKRRKCSNCGRLGHRRTRCPNRAGQEGGQPCVGVNKRVRGTQVVQEDAPSNNPEAVSLGDL 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02933 796 Pfam MULE transposase domain 303 397 IPR018289 -
Arst3g02933 796 Pfam FAR1 DNA-binding domain 93 183 IPR004330 -
Arst3g02933 796 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 678 IPR031052 GO:0006355
Arst3g02933 796 ProSiteProfiles Zinc finger CCHC-type profile. 739 756 IPR001878 GO:0003676|GO:0008270
Arst3g02933 796 SUPERFAMILY Retrovirus zinc finger-like domains 721 761 IPR036875 GO:0003676|GO:0008270
Arst3g02933 796 Pfam SWIM zinc finger 592 613 IPR007527 GO:0008270
Arst3g02933 796 ProSiteProfiles Zinc finger SWIM-type profile. 568 616 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02933 Arst-Chr3 42842756 42850323 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst3g02933 MULE 5.6e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02933 - - aip:107620408 1134.4