Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02932 ATGATTTCAATTTATTCAGAGAGGATGGGGTCCTGCAGCCGTGTTGTAGAGGGAACGTGCCAGTGGAATGTGAGGAGCAGGGATGATTGGGTTCAACGCAGCGGTGTAGGTTTAGATGAGCAGGAAACATTATATGACATGGGAATTGAAGCAGAGGAATACTTTCGTGACTATGCAAGTAAGGATGATGGTCGTAACGAAGGGTTCGATTCGGATGAAGGAGTGGGGCCAGATGATGTCCTTCGAATGGAATTTAACACTCCAGATGAAGCCAAATCCTTTTATAATAACTATAGCCGATTAAAGGGATTTTCTACGAGGCAAGGGAGGAAGGTAACAAATACTGCAGGGGATATTGTGCGATACACATTTGTGTGCAATAGGCAAGGGTATCGGGAGAAGAAATGGCTACAGATGGCTAATCGAAAACGGGAGCACAAGATTATGACTCGTTGTGGTTGCCTTGCCGAGATGAGGATAAAGAGAAAAGATGGGAGTGGCAAATGGTACGTGTCTCGGTTTGTGGATGAGCATAATCATGAACTCGCATCTGGCAAGTTCGTCGATTACTTGAGGTCGCACAGGCGGCTATCTGAAGTAGAGATTGCACAAATGACTAGCTTGAGGGAGGTTGGTATCAGCATTCCTAAAATATATGAATCCTTCGCGGCACAGCTTGGGGGTTTTAACCTTGTGACATTCACAAAGCAAGACATGTATAATGAGGTGAGGCGACAAAGAGAACTGCAAAATGGAGATGTAAGCGCTGCAATTCGATACTTGGAAGGTGTTTCCCGTGTAGACAACAGAATATTTTGGAGGTACAAGGTTGGGTCTGAAAACAATCTTTGTGACCTATTTTGGAGTGACGGGCGCAGTCAGTTCGACTATGCAATATTCGGAGATGTTCTAGCCTTCGATGCTACTTATGGCCGAAACAAGTACAATTTGCCTGTTGTTGTGTTCTCGGGAGTTAACCACCACAACCAAACATGTGTCTTCGGATGTGCAATGGTCTCGTGTGAAACACAAGAGTCCTACATCTGGGTTTTGCGGCAGTTTTTGGAATGCATGGAAGGAAAGGCCCCTAAGGCAGTCATCACAGATGGAGATACCTCGATGCGAAATGCTATACGTCATGTATTTCCCGAAACCCATCACAGGCTATGTGCTTGGCATTTGCTTCGTAATGCGACTTCCAATATATGTGACTCACGATTCACCCAGCTATTTAGACACTGCATGCTTGCGGACATGGAGGTTGATGAGTTCGAGGCGCAATGGGAGGCAATGCTGGATGAGTGTGGGGTTCGTGAAGTCGAATGGGTGAAGGATTTGTACCGCAAAAAAACTGCATGGGCGACAGCATACATCAGAGGCCAATTTTTTGCTGGAATACGGACAACGTCCCGTTGTGAATCTCTACATGCCAAGCTGGGCAGGTTTGTGGAGAGTAGATACGGGGTCCTTGAATTTGTCACAAACTTCCAAAGATGCATTGATTTCTTGCGAGACAATGAGGACGAGCTTGAATTTCGTTCATGGTACGGAACTCCAGTCTTGCAAACTGAGTTTGTTGAGCTTGAGAAGGATGGGTGGACAAAGTATACTCGGGAGATGTTTTGGCGATTTCGTGAAGCTCTTAAAAGGCCGGAAAAGAAGTGGGAGGTTTTGAGGCAAAATGTGGGTAACAAATTCAGCTGCACCTGCCTGAGAATGGAATCATTCGGACTGCCCTGTCTCCACATACTAGCTGTGTTGGTGCGCTTGGATTATACTATCATTCCCAATACGCTTGTGCTCCGCAGATGGTCGAAGATAGCAAAGTTGCACTATGGCTTAAATTGCACTAGAAATGAAACACAGGAGCAAACAACAACGTATAGGTCCCGGTTAGGAGCTTTTGCTCAGCTATGCACACGACTTGGCCGGGTTGCATGCATGAGCGATGAGGACTTTAAGTACTACTCACATAAGGTACTAACTGACACTATCTGCCTGGAAATTAAGAATGGCCTCAGGCCCCCGGAAGACGTAGGACTAACGGCGGAGGAACAACGAGTGAAGGACCCCATCAGCGTGAGAACAAAGGGTACTGGTCGACTCAGCCAGGCATCTGCATCGACCGGGAAAAAACGACGCAAGTGTAGCAACTGTGGCCGACTCGGTCATCGAAGGACCCGTTGTCCAAATCGTGCAGGTCAGGAGGGTGGCCAACCGTGTGTGGGCGTGAATAAGAGAGTTCGAGGTACCCAGGTGGTGCAGGAGGATGCTCCTTCCAACAACCCGGAGGCTGTGTCACTTGGCGACCTTTGA 2316 0.4741 MISIYSERMGSCSRVVEGTCQWNVRSRDDWVQRSGVGLDEQETLYDMGIEAEEYFRDYASKDDGRNEGFDSDEGVGPDDVLRMEFNTPDEAKSFYNNYSRLKGFSTRQGRKVTNTAGDIVRYTFVCNRQGYREKKWLQMANRKREHKIMTRCGCLAEMRIKRKDGSGKWYVSRFVDEHNHELASGKFVDYLRSHRRLSEVEIAQMTSLREVGISIPKIYESFAAQLGGFNLVTFTKQDMYNEVRRQRELQNGDVSAAIRYLEGVSRVDNRIFWRYKVGSENNLCDLFWSDGRSQFDYAIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGCAMVSCETQESYIWVLRQFLECMEGKAPKAVITDGDTSMRNAIRHVFPETHHRLCAWHLLRNATSNICDSRFTQLFRHCMLADMEVDEFEAQWEAMLDECGVREVEWVKDLYRKKTAWATAYIRGQFFAGIRTTSRCESLHAKLGRFVESRYGVLEFVTNFQRCIDFLRDNEDELEFRSWYGTPVLQTEFVELEKDGWTKYTREMFWRFREALKRPEKKWEVLRQNVGNKFSCTCLRMESFGLPCLHILAVLVRLDYTIIPNTLVLRRWSKIAKLHYGLNCTRNETQEQTTTYRSRLGAFAQLCTRLGRVACMSDEDFKYYSHKVLTDTICLEIKNGLRPPEDVGLTAEEQRVKDPISVRTKGTGRLSQASASTGKKRRKCSNCGRLGHRRTRCPNRAGQEGGQPCVGVNKRVRGTQVVQEDAPSNNPEAVSLGDL 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02932 771 Pfam FAR1 DNA-binding domain 93 183 IPR004330 -
Arst3g02932 771 ProSiteProfiles Zinc finger CCHC-type profile. 714 731 IPR001878 GO:0003676|GO:0008270
Arst3g02932 771 Pfam SWIM zinc finger 567 588 IPR007527 GO:0008270
Arst3g02932 771 Pfam MULE transposase domain 303 397 IPR018289 -
Arst3g02932 771 ProSiteProfiles Zinc finger SWIM-type profile. 555 591 IPR007527 GO:0008270
Arst3g02932 771 SUPERFAMILY Retrovirus zinc finger-like domains 696 736 IPR036875 GO:0003676|GO:0008270
Arst3g02932 771 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 653 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02932 Arst-Chr3 42842756 42850324 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst3g02932 MULE 5.4e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02932 - - aip:107620408 1092.41