Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02894 ATGTTTTCTCAACAAGAGGAGGATCTTATAATCACTCTCCATGAGGTTCTTGGAAATAGGTGGGCACAGATTGCAGCACAGTTACCAGGAAGAACAGATAATGAGATAAAGAATTTCTGGAATTCATGTCTGAAGAAGAAGCTAATGAAGCAAGGGATTGATCCAACTACACACAAGCCTCTTCATAATCATGAAGAAGACAAAGATAATGATATTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATACAACAACACAAGCAGCATGTTCTTCTTCTTCTTCCATGGCAATGTTAGATGGAATTATTGGAGGAGTTTCATCATTATCATCATCATCATTATTATTAGACCCTTTGACATGCTTGGATTTTTCTCATCATCATCATGAAAACTATGGATTATTATTCTCTTCAATGCCAAGCCTAGAAATGAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGCATTGCTCTCATCAACATCATCATGGGATTGTTGTAGTAATGAAGAGGAGAATAACAAGTTAGAATCTTTGTTTCAGTTTCATCATCAACAAGTCAATGCAATCAAATCTGAGCAGGAATTCAATACAAATTATAATAATGTGCAGCAGAATTCAATGCAAGAAGATTTCATCAGCAGCTATAATAATTTAAGGTCACTCTCATCAGAAGATCTATCAGCAGCAGCAGCAGGACCAAATTTTGATGTATTCCACCAGATATGA 753 0.3147 MFSQQEEDLIITLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQGIDPTTHKPLHNHEEDKDNDINNNNNNNNNNNNNNNTTTQAACSSSSSMAMLDGIIGGVSSLSSSSLLLDPLTCLDFSHHHHENYGLLFSSMPSLEMNNNNNNNNNNNNNNNALLSSTSSWDCCSNEEENNKLESLFQFHHQQVNAIKSEQEFNTNYNNVQQNSMQEDFISSYNNLRSLSSEDLSAAAAGPNFDVFHQI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02894 250 MobiDBLite consensus disorder prediction 54 93 - -
Arst3g02894 250 Pfam Myb-like DNA-binding domain 2 43 IPR001005 -
Arst3g02894 250 CDD SANT 2 41 IPR001005 -
Arst3g02894 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 48 IPR017930 -
Arst3g02894 250 ProSiteProfiles Myb-like domain profile. 1 44 IPR001005 -
Arst3g02894 250 SUPERFAMILY Homeodomain-like 2 54 IPR009057 -
Arst3g02894 250 PANTHER MYB DOMAIN PROTEIN 55 1 216 - -
Arst3g02894 250 Coils Coil 250 250 - -
Arst3g02894 250 MobiDBLite consensus disorder prediction 54 72 - -
Arst3g02894 250 MobiDBLite consensus disorder prediction 73 93 - -
Arst3g02894 250 FunFam Transcription factor MYB86 1 78 - -
Arst3g02894 250 Gene3D - 1 48 - -
Arst3g02894 250 SMART sant 2 46 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02894 Arst-Chr3 42602360 42603847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02894 2 66 MYB Transcription Factor Family AT1G57560 75.385 3.21e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst3g02894 Myb_DNA-binding 7.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02894 K09422 - cave:132175549 158.688