Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02891 ATGGAAACGAGTCCCGGCCGTACGATTAAGCTCCTCTGCAGCTACGGCGGCAAGATCCTCCCACGCGCTACCGACGGCGAGCTCCGTTACATCGGTGGCCACACCAGAGTCCTCACCGTGGATCGTTCCATTTGCTTCTCAGACTTGTTGGTAAAGCTAGGAGAGTTGTGCGGTTCGTCTGTGACGTTACGGTGTCAATTGCCGAACGGAGATTTAGAAACCTTGATCTCCGTCACCAACGACGAAGATCTGACGCACATAATTGAAGAATATGACCGCGCTTCGTCGAAACTACCTCATCCGTTGAAGATCAGAGCCGTGCTGTTTCCGCCAAAATCATCGAGGAAGGTTTCTCCGGCGACGTCGTCTCCGTCGTTGTCTTCCTCTGCTTCATCCAGCGCCAGTCACTCGCCAGCAAGATCTCCGTACACATCCGCGGAATCGCTGCCGCATGCGGCGGCGTATCGCGTCGTCCGCCAAAGCCGTCCTGTCCCGATCCGTAACGGATCGGCGAAAGCGTGTTGCTACAACGGCCAGCTAGAAGGAAGCCCTAGGTTTCTTTATTACGGACCTCGCTTCAGTAATTATTGCCATTGA 597 0.5477 METSPGRTIKLLCSYGGKILPRATDGELRYIGGHTRVLTVDRSICFSDLLVKLGELCGSSVTLRCQLPNGDLETLISVTNDEDLTHIIEEYDRASSKLPHPLKIRAVLFPPKSSRKVSPATSSPSLSSSASSSASHSPARSPYTSAESLPHAAAYRVVRQSRPVPIRNGSAKACCYNGQLEGSPRFLYYGPRFSNYCH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02891 198 SMART PB1_new 23 109 IPR000270 GO:0005515
Arst3g02891 198 Pfam PB1 domain 27 97 IPR000270 GO:0005515
Arst3g02891 198 CDD PB1_UP2 12 109 - -
Arst3g02891 198 Gene3D - 30 107 - -
Arst3g02891 198 MobiDBLite consensus disorder prediction 115 144 - -
Arst3g02891 198 PANTHER OS05G0427100 PROTEIN-RELATED 4 145 - -
Arst3g02891 198 SUPERFAMILY CAD & PB1 domains 25 117 - -
Arst3g02891 198 MobiDBLite consensus disorder prediction 113 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02891 Arst-Chr3 42550074 42551272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02891 9 114 MAP Kinase Kinase Kinase AT1G04700 47.170 7.24e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02891 - - gmx:100797123 260.766