Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02887 ATGGAATCTGGTGGAGCTAATAACTTCTACTCAGTTGATGATGAGTTCAGATTGGATACCAAGTGGCTTATTGATCCTAAGCATCTCTATGTTGGGCCACGGATTGGTGAAGGGGCTCATGCCAAAGTCTATGAGGGAAAATACAAAGACCAGGCTGTTGCTATCAAAATTCTACACAAAGGAGAGACTCCGGAAGATATCGCCAAGCGAGAAGGCCGGTTCGCGAGGGAGGTCGCGATGTTGTCTAGAGTGCAGCATAAGAACTTGGTGAAGTTTATTGGTGCATGCAAGGAGCCTGTGATGGTGATAGTCACTGAGCTCTTGTTGGGAGGAACATTGCGGAAGTATTTGCTTAGCATGCGACCGAAATGCTTGGACAGACATCTTGCCATTGGTTTTGCGCTTGATATTGCGCGTGCCATGGAGTGCCTGCATTCCCATGGGATCATCCACCGTGATCTTAAACCCGATAACTTGCTTTTGACCGAAGACCAAAAAATAGTCAAGCTCGCAGATTTCGGCTTAGCAAGAGAAGAATCATTAACTGAGATGATGACTGCAGAAACAGGAACTTACCGTTGGATGGCTCCGGAGTTGTATAGCACTGTCACACTGAGGCAGGGTGAGAAGAAGCATTACAATCATAAAGTCGATGCGTATAGCTTCGCAATCGTGTTGTGGGAGCTCATACACAACAAAGTTCCTTTTGAAGGCATGTCAAACCTCCAGGCAGCATATGCTGCAGCCTTCAAGAATGTAAGACCAAGTGCAGAGAATCTTCCTGAGCAATTGGCCGAAATCCTAACTTTGTGCTGGCAAGAGGATCCAAACGCCCGACCAAACTTCACTCAGATAATCCAGATGCTCCTGAATTATTTTTACACCATTGCGCCGCCTGAACCCATGATTCCTTCAAGAATATTCACTTCCGAGAACACTGTCTTGCCACCAGAGTCACCCGGTACTAGGTCCTTGATGGCAAAACGCGATGACACTGGGGATACACCAAGAGCAACAGATGAAACCAGGCTTAATAGTTTTCTTTGCTGCTTCAGCCAGTGTTATTAA 1068 0.4644 MESGGANNFYSVDDEFRLDTKWLIDPKHLYVGPRIGEGAHAKVYEGKYKDQAVAIKILHKGETPEDIAKREGRFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLSMRPKCLDRHLAIGFALDIARAMECLHSHGIIHRDLKPDNLLLTEDQKIVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKVPFEGMSNLQAAYAAAFKNVRPSAENLPEQLAEILTLCWQEDPNARPNFTQIIQMLLNYFYTIAPPEPMIPSRIFTSENTVLPPESPGTRSLMAKRDDTGDTPRATDETRLNSFLCCFSQCY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02887 355 MobiDBLite consensus disorder prediction 316 339 - -
Arst3g02887 355 Gene3D Transferase(Phosphotransferase) domain 1 110 297 - -
Arst3g02887 355 FunFam serine/threonine-protein kinase HT1 110 310 - -
Arst3g02887 355 PRINTS Tyrosine kinase catalytic domain signature 260 282 IPR001245 GO:0004672|GO:0006468
Arst3g02887 355 PRINTS Tyrosine kinase catalytic domain signature 217 239 IPR001245 GO:0004672|GO:0006468
Arst3g02887 355 PRINTS Tyrosine kinase catalytic domain signature 105 118 IPR001245 GO:0004672|GO:0006468
Arst3g02887 355 PRINTS Tyrosine kinase catalytic domain signature 143 161 IPR001245 GO:0004672|GO:0006468
Arst3g02887 355 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 24 289 - -
Arst3g02887 355 Gene3D Phosphorylase Kinase; domain 1 17 108 - -
Arst3g02887 355 Pfam Protein tyrosine and serine/threonine kinase 32 289 IPR001245 GO:0004672|GO:0006468
Arst3g02887 355 ProSitePatterns Protein kinases ATP-binding region signature. 35 56 IPR017441 GO:0005524
Arst3g02887 355 SUPERFAMILY Protein kinase-like (PK-like) 20 317 IPR011009 -
Arst3g02887 355 SMART serkin_6 29 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02887 355 MobiDBLite consensus disorder prediction 324 338 - -
Arst3g02887 355 CDD STKc_MAP3K-like 35 289 - -
Arst3g02887 355 ProSiteProfiles Protein kinase domain profile. 29 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02887 355 FunFam Kinase suppressor of Ras 1 18 108 - -
Arst3g02887 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02887 Arst-Chr3 42512780 42515557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02887 16 355 MAP Kinase Kinase Kinase AT5G50180 77.941 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Arst3g02887 PK_Tyr_Ser-Thr 4.1e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02887 - - gmx:100796593 659.062