Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02884 ATGAACCTCACTTCTCATTCTTCACACAACACAACAATGGCTGCTGCGACTTCTCCCACTGTTCCTATGGAAGAAGAAGATGACGTCACAGCCACAGCCACAAACCAAAACCTTCAAACTCATCAAAACGGCGTCGTTCCTTCCTCTCCCATGATTCCCGTTCCCGACGACAAGATCGTTCTCCCTGTTGAGGTCTGCTTGAAGCCTTCCAGCACTGCTTCTATCCGTGACGTTCGTTCCGCTATCGAAAGGATGCTTGAGAAGAGGAGTTTGAGCTATTGTGATGGCCCCATTCCTCTCCCCATGGACGAACCCTTTCTCGCCGACAACGTCCACAGAATTTGTATTTGTGACACAGATGAAGGGATGCACAATGATAATGTTCTTTTGTTCTGGCAAGTCAAGCCAGTTGTCCATGTCTTTCAGCTTAGCGAGGAAGGACCATGTGAGGATATAAGCTCTGATGGCCAGAGTTCCAGCTTCAATGAATGGATTCTTCCTGCAAAAGAATTTGATGGCATGTGGGAAAGTTTAATATTCGAATCTGGTCTAAAGCAAAGGTTGTTACGTTATGCAGCTAGTGCTTTGCTCTTTACTGAAAAAGGTGTTGATCCATTCCTTGTTTCATGGAATCGTATAATTCTTCTACATGGACCCCCTGGGACTGGAAAGACTTCGTTATGTAAAGCATTAGCTCAGAAATTATCGATTCGATTCAATTCAAGATTCCCACAGTGCCAGCTTATTGAAGTGAATGCACATTCTTTATTCAGTAAATGGTTTTCTGAAAGTGGCAAGCTGGTTGCGAAACTTTTCCAAAAGATTCAAGAAATGGTAGAGGAAGAAAGCAATCTAGTATTTGTTTTGATTGATGAAGTCGAAAGCCTTGCTGCGGCCAGGAAAGCTGCTATATCCGGTTCAGAACCTTCAGATTCTATTCGGGTTGTAAATGCATTACTAACTCAGATTGACAAGTTAAAATCGTCTCCAAATGTGATAATCCTAACCACATCCAACATAACTGCTGCTATTGATATTGCTTTTGTCGACCGAGCTGATATTAAAGCATATATTGGTCCCCCGACACTTCAAGCTCGATATGAAATATTAAGGTCTTGCTTGCAGGAATTGATGCGTACGGGGATCTTAACTAGTTTACAGGGTTGTGATAACATCACACTTCCAAGTTATGCCAGTGCAAAGGATAGGTCGAGTGCACCGGATTTTCATGAGGTTACTGCATCCATGCAACTATGCAACCAACTTCTTGAAACTGCCAAGGCCTGTGAGGGAATGAGTGGGAGGTCCTTGAGAAAGCTTCCATTTTTGGCACATGCTGCCCTTGCCAATCCTTTCGATTGCAATCCTATCAAGTTCTTATGTACAATGATTGAAACGGCAAAGAGGGAGCGTTCTGAGCTTCCTGACTAA 1431 0.4347 MNLTSHSSHNTTMAAATSPTVPMEEEDDVTATATNQNLQTHQNGVVPSSPMIPVPDDKIVLPVEVCLKPSSTASIRDVRSAIERMLEKRSLSYCDGPIPLPMDEPFLADNVHRICICDTDEGMHNDNVLLFWQVKPVVHVFQLSEEGPCEDISSDGQSSSFNEWILPAKEFDGMWESLIFESGLKQRLLRYAASALLFTEKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRFPQCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVLIDEVESLAAARKAAISGSEPSDSIRVVNALLTQIDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYIGPPTLQARYEILRSCLQELMRTGILTSLQGCDNITLPSYASAKDRSSAPDFHEVTASMQLCNQLLETAKACEGMSGRSLRKLPFLAHAALANPFDCNPIKFLCTMIETAKRERSELPD 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02884 476 Gene3D - 153 377 IPR027417 -
Arst3g02884 476 CDD RecA-like_Pch2-like 160 358 - -
Arst3g02884 476 FunFam pachytene checkpoint protein 2 homolog 154 376 - -
Arst3g02884 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 444 IPR027417 -
Arst3g02884 476 MobiDBLite consensus disorder prediction 1 18 - -
Arst3g02884 476 SMART AAA_5 210 362 IPR003593 GO:0016887
Arst3g02884 476 PANTHER PACHYTENE CHECKPOINT PROTEIN 2 29 473 IPR044539 -
Arst3g02884 476 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 214 232 IPR001270 GO:0005524
Arst3g02884 476 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 328 342 IPR001270 GO:0005524
Arst3g02884 476 MobiDBLite consensus disorder prediction 1 30 - -
Arst3g02884 476 ProSitePatterns AAA-protein family signature. 332 351 IPR003960 GO:0005524|GO:0016887
Arst3g02884 476 Pfam ATPase family associated with various cellular activities (AAA) 214 359 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02884 Arst-Chr3 42483425 42488110 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02884 159 377 Calmodulin-binding Proteins AT3G56690 29.911 5.87e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02884 K22399 - gmx:100795009 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02884 3 42483425 42488110 Arst3g02884 3 42483425 42488110 ECH