Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02879 ATGCCGCAAGATTCCTCCGATCAAGACCTCGACGACGCCGATTCCGAGTTCGTTGAGGTTGACCCAACCGGTCGCTATGGTCGGTACAAGGAAGTTTTAGGGAAGGGAGCTTTCAAGAAAGTATATCGAGCATTTGATGAGTTGGAAGGAATTGAAGTAGCTTGGAATCAGATTAAGGTGGCGGATCTGCTGCGTAACTCGGAAGATTTGGAGAGACTTTATTCTGAGGTCCATCTGCTCAAGACGTTGAAGCACAAGAATATAATTAAGTTCTACAATTCGTGGGTTGACACCAAGAATGAGAACATCAACTTCATTACCGAGATTTTCACCTCGGGGACATTACGCCAATATCGTAAGAAACACAAGCATGTTGATTTGAGAGCTTTGAAGAAATGGTCTAAGCAGATTTTGGAGGGCCTTTTATATCTTCACAGTCATAATCCTCCAGTTATACATCGAGACCTTAAGTGTGACAACATTTTTGTCAACGGGAATCAAGGGGAGGTAAAAATTGGAGATTTAGGGTTGGCAGCTATTCTTCAACAGGCCCAAGCAGCTCACAGTGTCATAGGTACCCCGGAGTTCATGGCCCCAGAACTTTATGAAGAAGAGTACAACGAGCTTGTTGATATCTACGCTTTTGGAATGTGCTTGCTAGAGTTGGTAACCTTTGAGTATCCATACGTTGAATGTTCCAATGCTGCTCAAATATACAAGAAAGTGACATCGGGAATAAAGCCAGCATCATTGGCAAAAGTGGCAGATCAAGAAGTTAAGGCATTCATTGAAAAGTGTATCGCTAATGTTTCAGAACGGTTGCCTGCAAAGGCTCTCTTGATGGATCCCTTCCTTCAGTCTGACTCTGATAGTGAAAGTGTAGGTCGTTCTTCAAGGTCTGGAACCCATCATTCAGGAAATAGTTCTAATAATCAAGCAATTGGAAAAAGTGTTCAGGATGTTTCTGGTGATTCAAATAGGGAATTCACAGTGGAAGGTCAGAGGAAAGATATTGATACAATATTTTTAAAACTGCGAATAGCAGACTCCTCAGGTCATGTTCGGAATATCCACTTCCCTTTCGATATTGGAGCGGACACTGCAATCTCTGTTGCTAGTGAAATGGTCGAGGAGTTGGAACTTACTGATCAAGATGTCACAACTATTGCTGAGACAATTGACTCTGAAATTCGATCTCTCATTCCTGGTTGGAACCCCAGTGAAACTCCTGCTACTAATGTTCCTGAAGATTCAGCAGTTTCAGATGGCTGTACCTCTGCTGAAACTAGGAGTGTGTCTTCTCCTACAGAAAATGATTCAACCACTCCTTCTAGCAACCTTGCATTAGAAATACTACGTTCAGGTCGTAAGTACTGGTCAGACTCACCTAAGGGAGTTTGTGGAAACCCTTTATCTAGGCATGGTTCTTCAAACTTGTCCCATGTAGGTGATGCAAATGCTGAGAAAGGAAGCTTGACTGCAAATGGTGCTATTTCAGATGAACTTGAGCCTGACCAGGTTACCTGTGTCGGTGCTTACTGTGCAGAGAAGGAATGTGATAGTACTGGTGATTCCCCCTCCACCGAGAGAACTATTACCTCTGGATATTTGGAAGAGACCAGTGAAGCATCATCTCTGGAAAAAATACCTGAAAGTTTGGAAGTTTCTGAAATAGATGCCAGTAAAATAGCACTGCAACTTGAGAGTTTGTTGACAAATCAAAAAGAGGAGCTGGAAGAACTAAAGAGGAAGCAAAAATTAGCTGTCTCTAATCTTTTGAAGGAACTTTCACCAGAAATTTGTAAGAAGGTCCTAAATATATGCAACCTGCAGATGCTTGAATATGAAAATTTATAG 1857 0.4211 MPQDSSDQDLDDADSEFVEVDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQIKVADLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSKQILEGLLYLHSHNPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQAQAAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYVECSNAAQIYKKVTSGIKPASLAKVADQEVKAFIEKCIANVSERLPAKALLMDPFLQSDSDSESVGRSSRSGTHHSGNSSNNQAIGKSVQDVSGDSNREFTVEGQRKDIDTIFLKLRIADSSGHVRNIHFPFDIGADTAISVASEMVEELELTDQDVTTIAETIDSEIRSLIPGWNPSETPATNVPEDSAVSDGCTSAETRSVSSPTENDSTTPSSNLALEILRSGRKYWSDSPKGVCGNPLSRHGSSNLSHVGDANAEKGSLTANGAISDELEPDQVTCVGAYCAEKECDSTGDSPSTERTITSGYLEETSEASSLEKIPESLEVSEIDASKIALQLESLLTNQKEELEELKRKQKLAVSNLLKELSPEICKKVLNICNLQMLEYENL 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02879 618 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Arst3g02879 618 MobiDBLite consensus disorder prediction 405 446 - -
Arst3g02879 618 MobiDBLite consensus disorder prediction 287 328 - -
Arst3g02879 618 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02879 618 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02879 618 MobiDBLite consensus disorder prediction 287 331 - -
Arst3g02879 618 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Arst3g02879 618 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Arst3g02879 618 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 596 - -
Arst3g02879 618 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 343 397 IPR024678 GO:0004674|GO:0005524
Arst3g02879 618 Gene3D - 339 426 - -
Arst3g02879 618 MobiDBLite consensus disorder prediction 400 446 - -
Arst3g02879 618 CDD STKc_WNK 25 285 - -
Arst3g02879 618 Coils Coil 564 595 - -
Arst3g02879 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Arst3g02879 618 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Arst3g02879 618 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02879 618 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02879 Arst-Chr3 42444718 42448280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02879 15 404 MAP Kinase Kinase Kinase AT3G22420 55.023 3.89e-169 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Arst3g02879 Pkinase 1.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02879 K08867 - gmx:100301899 779.63